RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.81□□□□□ -0.84
SPARC-201ENST00000231061 CD163L1Q9NR16 1453 aa9.81□□□□□ -0.84
SPARC-201ENST00000231061 MSNP26038 577 aaKnown RBP9.8□□□□□ -0.84
SPARC-201ENST00000231061 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
SPARC-201ENST00000231061 ARHGAP27Q6ZUM4 889 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 AGBL1Q96MI9 1066 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 IL4RP24394 825 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 ATP6V1AP38606 617 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 GNAI1P63096 354 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 DEF6Q9H4E7 631 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 RASA3Q14644 834 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
SPARC-201ENST00000231061 RETREG1Q9H6L5 497 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 N6AMT1Q9Y5N5 214 aa9.8□□□□□ -0.84
SPARC-201ENST00000231061 LRRC7Q96NW7 1537 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 MYCLP1P12525 358 aaPredicted RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 PSMC1P62191 440 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 RRS1Q15050 365 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 AP1ARQ63HQ0 302 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 NGDNQ8NEJ9 315 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 ETAA1Q9NY74 926 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 CHPF2Q9P2E5 772 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 TIMM44O43615 452 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 KIF5CO60282 957 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 MEX3CQ5U5Q3 659 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 TDRD7Q8NHU6 1098 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 PPP4CP60510 307 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 TWISTNBQ3B726 338 aaPredicted RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
SPARC-201ENST00000231061 PAGR1Q9BTK6 254 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 JRKLQ9Y4A0 524 aa9.79□□□□□ -0.84
SPARC-201ENST00000231061 TRAK2O60296 914 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 VAMP4O75379 141 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 LARP1BQ659C4 914 aaKnown RBP9.78□□□□□ -0.84
SPARC-201ENST00000231061 COG3Q96JB2 828 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 MBIPQ9NS73 344 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 PNPLA6Q8IY17 1366 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 MED14O60244 1454 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 MYO5BQ9ULV0 1848 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 CHAF1AQ13111 956 aaPredicted RBP9.78□□□□□ -0.84
SPARC-201ENST00000231061 DCTN1Q14203 1278 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 TMEM110Q86TL2 294 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 FMNL3Q8IVF7 1028 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
SPARC-201ENST00000231061 FAM83GA6ND36 823 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 MYBL2P10244 700 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 FAM135BQ49AJ0 1406 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
SPARC-201ENST00000231061 UBAP1Q9NZ09 502 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 SYNRGQ9UMZ2 1314 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 PCDHGA4Q9Y5G9 962 aa9.78□□□□□ -0.84
SPARC-201ENST00000231061 ALKQ9UM73 1620 aa9.77□□□□□ -0.84
SPARC-201ENST00000231061 NCKAP5LQ9HCH0 1330 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 HMMRO75330 724 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 PPP2R5BQ15173 497 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 GCC1Q96CN9 775 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 IFT57Q9NWB7 429 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 TRMT1Q9NXH9 659 aaKnown RBP9.77□□□□□ -0.85
SPARC-201ENST00000231061 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
SPARC-201ENST00000231061 CSPG5O95196 566 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 ARHGEF40Q8TER5 1519 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 FAM117BQ6P1L5 589 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 C10orf67Q8IYJ2 551 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 VPS37AQ8NEZ2 397 aa9.77□□□□□ -0.85
SPARC-201ENST00000231061 SREK1Q8WXA9 508 aaKnown RBP9.77□□□□□ -0.85
SPARC-201ENST00000231061 U3KPZ7 1027 aaPredicted RBP9.77□□□□□ -0.85
SPARC-201ENST00000231061 TMEM131LA2VDJ0 1609 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 TRIM64CA6NLI5 447 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 BMP2KLQ5H9B9 411 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 RPUSD2Q8IZ73 545 aaKnown RBP9.76□□□□□ -0.85
SPARC-201ENST00000231061 STK11IPQ8N1F8 1099 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 SPC24Q8NBT2 197 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 C17orf50Q8WW18 174 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 ESF1Q9H501 851 aaKnown RBP9.76□□□□□ -0.85
SPARC-201ENST00000231061 PREX1Q8TCU6 1659 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 CCDC92Q53HC0 331 aaPredicted RBP9.76□□□□□ -0.85
SPARC-201ENST00000231061 C8orf58Q8NAV2 365 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 TSC1Q92574 1164 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 PPIP5K1Q6PFW1 1433 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 NUTM2FA1L443 756 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
SPARC-201ENST00000231061 IL13P35225 146 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 RAD51AP2Q09MP3 1159 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 TOMM20Q15388 145 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 ZSCAN30Q86W11 494 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 RPS6KC1Q96S38 1066 aa9.76□□□□□ -0.85
SPARC-201ENST00000231061 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
SPARC-201ENST00000231061 RIMS2Q9UQ26 1411 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 NEBLO76041 1014 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 C4orf46Q504U0 113 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 FKBP15Q5T1M5 1219 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 NUDT16Q96DE0 195 aaKnown RBP9.75□□□□□ -0.85
SPARC-201ENST00000231061 SLC7A5P2Q9GIP4 190 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 PRPF4BQ13523 1007 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms