RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 TEX14Q8IWB6 1497 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 YEATS4O95619 227 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 MFSD6Q6ZSS7 791 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 SYKP43405 635 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 COPS6Q7L5N1 327 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 G2E3Q7L622 706 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 ZNF444Q8N0Y2 327 aaPredicted RBP9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC12Q8WUD4 166 aaPredicted RBP9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC113Q9H0I3 377 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 PHAXQ9H814 394 aaKnown RBP9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 PTGS1P23219 599 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 UBASH3AP57075 661 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 TDRD12Q587J7 1177 aaKnown RBP9.4□□□□□ -0.9
C1GALT1-201ENST00000223122 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 CCDC150Q8NCX0 1101 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 PRIMPOLQ96LW4 560 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 ALG1Q9BT22 464 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 GBP3Q9H0R5 595 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.91
C1GALT1-201ENST00000223122 SKILP12757 684 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 GNG11P61952 73 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 MCMDC2Q4G0Z9 681 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 RBSNQ9H1K0 784 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ZPR1O75312 459 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 CHMLP26374 656 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 CREB3L3Q68CJ9 461 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 RNF216Q9NWF9 866 aaPredicted RBP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 GRM8O00222 908 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 SNRPA1P09661 255 aaKnown RBP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ANAPC15P60006 121 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 TYRO3Q06418 890 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 IQSEC3Q9UPP2 1182 aaPredicted RBP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 RNF41Q9H4P4 317 aaPredicted RBP9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 PAXBP1Q9Y5B6 917 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 CCDC102BQ68D86 513 aa9.39□□□□□ -0.91
C1GALT1-201ENST00000223122 TFCP2Q12800 502 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 SHTN1A0MZ66 631 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 RUFY3Q7L099 469 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 CCDC171Q6TFL3 1326 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 RXRAP19793 462 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 SBNO2Q9Y2G9 1366 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 ASXL2Q76L83 1435 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 LMAN1P49257 510 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 RRAGBQ5VZM2 374 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 MRPS27Q92552 414 aaKnown RBP9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 BICC1Q9H694 974 aaKnown RBP9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 DNAI1Q9UI46 699 aa9.38□□□□□ -0.91
C1GALT1-201ENST00000223122 LMBR1LQ6UX01 489 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 PAG1Q9NWQ8 432 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 SPTY2D1Q68D10 685 aaPredicted RBP9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 KSR2Q6VAB6 950 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 CCDC129Q6ZRS4 1044 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 SLC4A4Q9Y6R1 1079 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 TSPY2A6NKD2 308 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 WTAPQ15007 396 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 TRMT1LQ7Z2T5 733 aaKnown RBP9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 KAT14Q9H8E8 782 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 ZNF219Q9P2Y4 722 aaPredicted RBP9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 TNRQ92752 1358 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 SHANK2Q9UPX8 1470 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 KDM5AP29375 1690 aaKnown RBP9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 TMEM266Q2M3C6 531 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
C1GALT1-201ENST00000223122 KDM6BO15054 1643 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 NPATQ14207 1427 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 UHRF1BP1Q6BDS2 1440 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 ZBTB43O43298 467 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 USO1O60763 962 aaKnown RBP9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 RNF187Q5TA31 235 aaPredicted RBP9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 CTR9Q6PD62 1173 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 MAP3K5Q99683 1374 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 PRC1O43663 620 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 SYT1P21579 422 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 WWC2Q6AWC2 1192 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 JADE2Q9NQC1 790 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 AKAP4Q5JQC9 854 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
C1GALT1-201ENST00000223122 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms