RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-201ENST00000221232 HSP90B1P14625 803 aaKnown RBP17.43■□□□□ 0.38
CNOT3-201ENST00000221232 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
CNOT3-201ENST00000221232 JAK2O60674 1132 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 TOB2Q14106 344 aaPredicted RBP17.42■□□□□ 0.38
CNOT3-201ENST00000221232 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 FGD1P98174 961 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 KCNB2Q92953 911 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 ZKSCAN5Q9Y2L8 839 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 NBPF14Q5TI25 921 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
CNOT3-201ENST00000221232 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 COPRSQ9NQ92 184 aa17.42■□□□□ 0.38
CNOT3-201ENST00000221232 COL15A1P39059 1388 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 GOLIM4O00461 696 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 CCDC39Q9UFE4 941 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 SLIT3O75094 1523 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 OFD1O75665 1012 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 HSPA2P54652 639 aa17.41■□□□□ 0.38
CNOT3-201ENST00000221232 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
CNOT3-201ENST00000221232 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
CNOT3-201ENST00000221232 TTC6Q86TZ1 520 aa17.4■□□□□ 0.38
CNOT3-201ENST00000221232 TMEM87AQ8NBN3 555 aa17.4■□□□□ 0.38
CNOT3-201ENST00000221232 ADCY5O95622 1261 aa17.4■□□□□ 0.38
CNOT3-201ENST00000221232 ATP5JP18859 108 aa17.4■□□□□ 0.38
CNOT3-201ENST00000221232 C17orf53Q8N3J3 647 aaPredicted RBP17.4■□□□□ 0.38
CNOT3-201ENST00000221232 RBM10P98175 930 aaKnown RBP17.39■□□□□ 0.37
CNOT3-201ENST00000221232 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 Q6ZUG5 572 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 STRN4Q9NRL3 753 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 LIG1P18858 919 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 NEK1Q96PY6 1258 aa17.39■□□□□ 0.37
CNOT3-201ENST00000221232 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.37
CNOT3-201ENST00000221232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
CNOT3-201ENST00000221232 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
CNOT3-201ENST00000221232 CKAP2LQ8IYA6 745 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 CYP21A2P08686 494 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 TAOK2Q9UL54 1235 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 BRF1Q92994 677 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 SNRKQ9NRH2 765 aa17.38■□□□□ 0.37
CNOT3-201ENST00000221232 PUS3Q9BZE2 481 aaKnown RBP17.37■□□□□ 0.37
CNOT3-201ENST00000221232 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
CNOT3-201ENST00000221232 KRT85P78386 507 aa17.37■□□□□ 0.37
CNOT3-201ENST00000221232 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
CNOT3-201ENST00000221232 OVOS2A0A0G2JMS6 1433 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 FOXO4P98177 505 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 HSP90AA2PQ14568 343 aaPredicted RBP17.36■□□□□ 0.37
CNOT3-201ENST00000221232 MCMDC2Q4G0Z9 681 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.36■□□□□ 0.37
CNOT3-201ENST00000221232 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
CNOT3-201ENST00000221232 ANKRD1Q15327 319 aa17.36■□□□□ 0.37
CNOT3-201ENST00000221232 DNTTIP2Q5QJE6 756 aaKnown RBP17.36■□□□□ 0.37
CNOT3-201ENST00000221232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.37
CNOT3-201ENST00000221232 CASP7P55210 303 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNOT3-201ENST00000221232 RABL6Q3YEC7 729 aaPredicted RBP17.35■□□□□ 0.37
CNOT3-201ENST00000221232 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
CNOT3-201ENST00000221232 ZNF609O15014 1411 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 AP5Z1O43299 807 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 HAUS7Q99871 368 aa17.35■□□□□ 0.37
CNOT3-201ENST00000221232 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-201ENST00000221232 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 STOX1Q6ZVD7 989 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-201ENST00000221232 H3BQV1 296 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
CNOT3-201ENST00000221232 LETM1O95202 739 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-201ENST00000221232 APOBRQ0VD83 1088 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 TTLL5Q6EMB2 1281 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 ARID3AQ99856 593 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 NCOA5Q9HCD5 579 aaKnown RBP17.33■□□□□ 0.36
CNOT3-201ENST00000221232 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-201ENST00000221232 KDM4AO75164 1064 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 PDCP20941 246 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 FAM184AQ8NB25 1140 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
CNOT3-201ENST00000221232 H7C1W4 665 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 CADPS2Q86UW7 1296 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 BICD2Q8TD16 824 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 FTOQ9C0B1 505 aaKnown RBP eCLIP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms