RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
CTDP1-201ENST00000075430 GTPBP4Q9BZE4 634 aaKnown RBP19.71■□□□□ 0.75
CTDP1-201ENST00000075430 ZSWIM6Q9HCJ5 1215 aa19.71■□□□□ 0.75
CTDP1-201ENST00000075430 ZNF330Q9Y3S2 320 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-201ENST00000075430 TTC21AQ8NDW8 1320 aa19.71■□□□□ 0.75
CTDP1-201ENST00000075430 Q6ZUG5 572 aa19.71■□□□□ 0.75
CTDP1-201ENST00000075430 SCAND2PQ9GZW5 306 aaPredicted RBP19.71■□□□□ 0.75
CTDP1-201ENST00000075430 TPM3P06753 285 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 PDCP20941 246 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 PSMA5P28066 241 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 RNF20Q5VTR2 975 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 CCDC73Q6ZRK6 1079 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 TBX22Q9Y458 520 aa19.7■□□□□ 0.74
CTDP1-201ENST00000075430 KINO60870 393 aaKnown RBP19.69■□□□□ 0.74
CTDP1-201ENST00000075430 GTF2F1P35269 517 aaKnown RBP eCLIP19.69■□□□□ 0.74
CTDP1-201ENST00000075430 GOLGA8FQ08AF8 430 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 GOLGA8DPQ0D2H9 430 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 SLC39A6Q13433 755 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 DLG5Q8TDM6 1919 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 RIC3Q7Z5B4 369 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 SMTNL1A8MU46 457 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 SIRT1Q96EB6 747 aa19.69■□□□□ 0.74
CTDP1-201ENST00000075430 A0A1B0GVL5 298 aa19.68■□□□□ 0.74
CTDP1-201ENST00000075430 HSP90AB4PQ58FF6 505 aa19.68■□□□□ 0.74
CTDP1-201ENST00000075430 BICC1Q9H694 974 aaKnown RBP19.68■□□□□ 0.74
CTDP1-201ENST00000075430 ERCC6LQ2NKX8 1250 aa19.68■□□□□ 0.74
CTDP1-201ENST00000075430 APOBRQ0VD83 1088 aa19.68■□□□□ 0.74
CTDP1-201ENST00000075430 GNL2Q13823 731 aaKnown RBP19.68■□□□□ 0.74
CTDP1-201ENST00000075430 NECTIN1Q15223 517 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 BEND3Q5T5X7 828 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 SYT10Q6XYQ8 523 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 FSIP1Q8NA03 581 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 EVI5LQ96CN4 794 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 GJB4Q9NTQ9 266 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 OGFRQ9NZT2 677 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 CTNNA3Q9UI47 895 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 TMC6Q7Z403 805 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 PLCD3Q8N3E9 789 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 SUCLG2Q96I99 432 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 DDX19AQ9NUU7 478 aaKnown RBP19.67■□□□□ 0.74
CTDP1-201ENST00000075430 NPHP3Q7Z494 1330 aa19.67■□□□□ 0.74
CTDP1-201ENST00000075430 ADAMTS13Q76LX8 1427 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 DDX17Q92841 729 aaKnown RBP19.66■□□□□ 0.74
CTDP1-201ENST00000075430 CCDC85AQ96PX6 553 aaPredicted RBP19.66■□□□□ 0.74
CTDP1-201ENST00000075430 EPC1Q9H2F5 836 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 ATP5J2-PTCD1G3V325 749 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
CTDP1-201ENST00000075430 HAND2P61296 217 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 KMT5BQ4FZB7 885 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 HSP90AB3PQ58FF7 597 aa19.66■□□□□ 0.74
CTDP1-201ENST00000075430 UTP14CQ5TAP6 766 aaKnown RBP19.66■□□□□ 0.74
CTDP1-201ENST00000075430 A0A0G2JS52 829 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 ANKLE2Q86XL3 938 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 ANKRD7Q92527 254 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 PTPRUQ92729 1446 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 LRRN4CLQ8ND94 238 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 FBXO38Q6PIJ6 1188 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 LRRC8AQ8IWT6 810 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 IGSF1Q8N6C5 1336 aa19.65■□□□□ 0.74
CTDP1-201ENST00000075430 LMOD1P29536 600 aaPredicted RBP19.64■□□□□ 0.74
CTDP1-201ENST00000075430 TOB2Q14106 344 aaPredicted RBP19.64■□□□□ 0.74
CTDP1-201ENST00000075430 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.74
CTDP1-201ENST00000075430 ZSWIM4Q9H7M6 989 aa19.64■□□□□ 0.74
CTDP1-201ENST00000075430 RPS6KB1P23443 525 aa19.64■□□□□ 0.73
CTDP1-201ENST00000075430 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
CTDP1-201ENST00000075430 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
CTDP1-201ENST00000075430 SASH1O94885 1247 aa19.64■□□□□ 0.73
CTDP1-201ENST00000075430 USP28Q96RU2 1077 aa19.64■□□□□ 0.73
CTDP1-201ENST00000075430 SSH2Q76I76 1423 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 SKIDA1Q1XH10 827 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 POLA2Q14181 598 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 GPHNQ9NQX3 736 aaPredicted RBP19.63■□□□□ 0.73
CTDP1-201ENST00000075430 KIF20AO95235 890 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 CABLES1Q8TDN4 633 aa19.63■□□□□ 0.73
CTDP1-201ENST00000075430 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 PROSER2Q86WR7 435 aaPredicted RBP19.62■□□□□ 0.73
CTDP1-201ENST00000075430 PLEKHG1Q9ULL1 1385 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 KIF18AQ8NI77 898 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 IFNKQ9P0W0 207 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 CDC42BPGQ6DT37 1551 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 GOLPH3LQ9H4A5 285 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 DIP2BQ9P265 1576 aa19.62■□□□□ 0.73
CTDP1-201ENST00000075430 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
CTDP1-201ENST00000075430 MAP4K1Q92918 833 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 SNRKQ9NRH2 765 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 KRT222Q8N1A0 295 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 MYD88Q99836 296 aa19.61■□□□□ 0.73
CTDP1-201ENST00000075430 DNAI1Q9UI46 699 aa19.6■□□□□ 0.73
CTDP1-201ENST00000075430 URI1O94763 535 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-201ENST00000075430 MARCKSP29966 332 aaPredicted RBP19.6■□□□□ 0.73
CTDP1-201ENST00000075430 CHRNA2Q15822 529 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms