RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Ccdc122Q8BVN0 290 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Chd1lQ9CXF7 900 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Bag3Q9JLV1 577 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Top2aQ01320 1528 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 GfapP03995 430 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 FerP70451 823 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Cfap100Q80VN0 613 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Znf365Q8BG89 408 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Cep19Q9CQA8 163 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Ankrd40Q5SUE8 363 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Phldb1Q6PDH0 1371 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Iqca1lA6H690 825 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Matr3Q8K310 846 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 PpanQ91YU8 470 aaKnown RBP9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Lztfl1Q9JHQ5 299 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Efcc1Q9JJF6 558 aa9.27□□□□□ -0.93
Spen-201ENSMUST00000078886 Q9D5Q8 446 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 PrxO55103 1391 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Tyro3P55144 880 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Zbtb16Q3UQ17 673 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Igsf3Q6ZQA6 1194 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 TkfcQ8VC30 578 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Atxn3Q9CVD2 355 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Bag2Q91YN9 210 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Arhgap24Q8C4V1 747 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 MycbpQ9EQS3 103 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Heatr4E9Q357 955 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Filip1Q9CS72 1211 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Arhgap5P97393 1501 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Igf2bp2Q5SF07 592 aaKnown RBP9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Gm21698A0A087WQP8 267 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Syt1P46096 421 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Ublcp1Q8BGR9 318 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Fam204aQ8C6C7 236 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 ErmnQ5EBJ4 281 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Zfp251Q6PCX8 632 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 IqcdQ9D3V1 458 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Setdb1O88974 1307 aa9.26□□□□□ -0.93
Spen-201ENSMUST00000078886 Arhgef5E9Q7D5 1581 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Stat1P42225 749 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 GpkowQ56A08 488 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Il1rapl2Q9ERS6 686 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Shroom4Q1W617 1475 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Rassf10Q8BL43 508 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Lrriq3Q14DL3 633 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Tshz3Q8CGV9 1081 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Ccdc124Q9D8X2 217 aaKnown RBP9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Kank1E9Q238 1360 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Ccdc121E9Q6D3 323 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Neurog2P70447 263 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Adcy3Q8VHH7 1145 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Vps36Q91XD6 386 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Ubxn1Q922Y1 297 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Speer4f2E9Q366 295 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 NpcdF8VQB8 469 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Slc7a3P70423 618 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Nop56Q9D6Z1 580 aaKnown RBP9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 SfswapQ3USH5 945 aaKnown RBP9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Pnpla2Q8BJ56 486 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Speer4bQ9D9F7 267 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Gm21663A0A0G2JE01 267 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 5031410I06RikE9Q4E0 267 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Gm5862K7N5V5 267 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Gm10220K7N660 267 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Krt15Q61414 452 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 CactinQ9CS00 772 aaKnown RBP9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Tbc1d7Q9D0K0 293 aa9.25□□□□□ -0.93
Spen-201ENSMUST00000078886 Nedd9O35177 833 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Ccdc97Q9DBT3 340 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Pkd2l2Q9JLG4 621 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Rnf41Q8BH75 317 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Tuft1O08970 390 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Ltv1Q6NSQ7 470 aaKnown RBP9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Smarcc2Q6PDG5 1213 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Dnaaf1Q9D2H9 634 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Znf287Q9EQB9 759 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Catsper2A2ARP9 588 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Krt90E9Q1Z0 538 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Ano6Q6P9J9 911 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Cep57Q8CEE0 500 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Gbp5Q8CFB4 590 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Atp1a4Q9WV27 1032 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Mroh7A2AVR2 1279 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Rapgef4Q9EQZ6 1011 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Soga1E1U8D0 1418 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Nub1P54729 614 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Smc6Q924W5 1097 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Tsnaxip1Q99P25 704 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Map3k1P53349 1493 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Asxl1P59598 1514 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Zbtb21E9Q444 1094 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Gsta4P24472 222 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Arl1P61211 181 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 HnrnpmQ9D0E1 729 aaKnown RBP9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Dpf1Q9QX66 387 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Prpf31Q8CCF0 499 aaKnown RBP9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Nudcd3Q8R1N4 363 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Ttc21aQ8C0S4 1314 aa9.24□□□□□ -0.93
Spen-201ENSMUST00000078886 Liat1Q810M6 228 aa9.23□□□□□ -0.93
Spen-201ENSMUST00000078886 Sh3gl3Q62421 347 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms