RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Fam114a1Q9D281 569 aa21.18■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Sf3b2Q3UJB0 878 aaKnown RBP21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tsg101Q61187 391 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Nol7Q9D7Z3 254 aaKnown RBP21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Sycp2lA0A0M3U1B0 842 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Bach2P97303 839 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Naa30Q8CES0 364 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ppm1fQ8CGA0 452 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Bicc1Q99MQ1 977 aaKnown RBP21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Klf15Q9EPW2 415 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Uchl5Q9WUP7 329 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Pnpla2Q8BJ56 486 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 BbxQ8VBW5 907 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Rai14Q9EP71 979 aaKnown RBP21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ythdc2B2RR83 1445 aaKnown RBP21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Fam107bQ3TGF2 131 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 RalylQ8BTF8 293 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Zbtb43Q9DAI4 467 aa21.17■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Bicdl1A0JNT9 577 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 RragbQ6NTA4 374 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Mrps25Q9D125 171 aaKnown RBP21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Traf3ip1Q149C2 625 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Acot9Q9R0X4 439 aaKnown RBP21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Gm3409A0A0G2JE67 319 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Supt6hQ62383 1726 aaKnown RBP21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Fam170aQ66LM6 333 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Peg3Q3URU2 1571 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 TnnQ80Z71 1560 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tbc1d2bQ3U0J8 965 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Naa15Q80UM3 865 aaKnown RBP21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Lrrfip2Q91WK0 415 aa21.16■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tm6sf1P58749 370 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Gtpbp4Q99ME9 634 aaKnown RBP21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Fam177a1Q8BR63 207 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Vps37cQ8R105 352 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Shroom2A2ALU4 1481 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Gjc1P28229 396 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Sun3Q5SS91 320 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 AmfrQ9R049 643 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Taf7Q9R1C0 341 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tbc1d8bA3KGB4 1114 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Bach1P97302 739 aa21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Tax1bp1Q3UKC1 814 aaKnown RBP21.15■□□□□ 0.98
Ebf3-201ENSMUST00000033378 BrapQ99MP8 591 aa21.14■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Rbm33Q9CXK9 1231 aaKnown RBP21.14■□□□□ 0.98
Ebf3-201ENSMUST00000033378 Ncapd2Q8K2Z4 1392 aa21.14■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Luc7l2Q7TNC4 392 aaKnown RBP21.14■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Prune1Q8BIW1 454 aa21.14■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Clec11aO88200 328 aa21.14■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Hdhd2Q3UGR5 259 aa21.14■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Map2k1P31938 393 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Amotl1Q9D4H4 968 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Adcy10Q8C0T9 1614 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Pet2A2AHY8 747 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Stx8O88983 236 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Plcd1Q8R3B1 756 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 WtapQ9ER69 396 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Disp1Q3TDN0 1521 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Naip7Q9JIB3 1402 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Eya1P97767 591 aa21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ncbp1Q3UYV9 790 aaKnown RBP21.13■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Zfp51Q3U4L8 781 aa21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ptcd1Q8C2E4 695 aaKnown RBP21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Znf568E9PYI1 671 aa21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Pik3ap1Q9EQ32 811 aa21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Rps6kb1Q8BSK8 525 aa21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Nap1l5Q9JJF0 156 aa21.12■□□□□ 0.97
Ebf3-201ENSMUST00000033378 L1td1Q587J6 782 aaKnown RBP21.11■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Terf2ipQ91VL8 393 aa21.11■□□□□ 0.97
Ebf3-201ENSMUST00000033378 PalldQ9ET54 1408 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Igflr1Q3U4N7 345 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Fam160b2Q80YR2 744 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Zkscan5Q9Z1D8 819 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Cyp4f39Q8BGU0 532 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Triml1Q8BVP1 470 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Rdm1Q9CQK3 281 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Elf2Q9JHC9 593 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Atp12aQ9Z1W8 1035 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Nfxl1E9Q8I7 918 aaKnown RBP21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Mtx1P47802 317 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ddx10Q80Y44 875 aaKnown RBP21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 TrdnE9Q9K5 693 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Paf1Q8K2T8 535 aa21.1■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Top1Q04750 767 aaKnown RBP21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ccdc148Q6P5U8 527 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Acnat2Q8BGG9 420 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Plcd3Q8K2J0 785 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 ZgpatQ8VDM1 511 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Adgrl2Q8JZZ7 1487 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ppp4r3aQ6P2K6 820 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Egfl6Q9JJZ5 550 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Akap2O54931 893 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Ccdc122Q8BVN0 290 aa21.09■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Speer4dL7N216 212 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Atp2b3Q0VF55 1220 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Atp1a4Q9WV27 1032 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Psmb7P70195 277 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Leo1Q5XJE5 667 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Cyp7a1Q64505 503 aa21.08■□□□□ 0.97
Ebf3-201ENSMUST00000033378 Vps54Q5SPW0 977 aa21.08■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms