RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tbc1d8bA3KGB4 1114 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Kif5bQ61768 963 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ttc12Q8BW49 704 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ppp6r3Q922D4 844 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Elf2Q9JHC9 593 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rlbp1Q9Z275 317 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Atp7aQ64430 1491 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tex14Q7M6U3 1450 aa11.56□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Lrrfip2Q91WK0 415 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Nop53Q8BK35 484 aaKnown RBP11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Epb41l2O70318 988 aaKnown RBP11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gys2Q8VCB3 704 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Hmgb1P63158 215 aaKnown RBP11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gnat3Q3V3I2 354 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tmem266Q8BZB3 538 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Pkd2l2Q9JLG4 621 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 AmfrQ9R049 643 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Sparcl1P70663 650 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Specc1Q5SXY1 1067 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Themis2Q91YX0 663 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Kcnh5Q920E3 988 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rasal2E9PW37 1286 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Irf9Q61179 399 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tsga10Q6NY15 697 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 NapgQ9CWZ7 312 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rai14Q9EP71 979 aaKnown RBP11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gucy1a3Q9ERL9 691 aa11.55□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gm10378F6XQQ1 160 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Krt8P11679 490 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ankrd24Q80VM7 985 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Plcd1Q8R3B1 756 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Specc1lQ2KN98 1118 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 RragbQ6NTA4 374 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rab3gap1Q80UJ7 981 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Eif3bQ8JZQ9 803 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ndufab1Q9CR21 156 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Wdr7Q920I9 1489 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Idi2Q8BFZ6 227 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Syce1Q9D495 329 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Eif4g1Q6NZJ6 1600 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Map3k7clP58500 142 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Eif3j1Q3UGC7 261 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ifit2Q64112 472 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Eif3j2Q66JS6 263 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Cers3Q1A3B0 383 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Trim34aQ99PP6 485 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Speer4bQ9D9F7 267 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ddx49Q4FZF3 480 aaKnown RBP11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Cfap69Q8BH53 942 aa11.54□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Aimp1P31230 310 aaKnown RBP11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Erich4Q3UNU4 136 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Nek11Q8C0Q4 628 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Pola1P33609 1465 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Slc7a3P70423 618 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Krt25Q8VCW2 446 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Gigyf1Q99MR1 1044 aaKnown RBP11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Dnm1P39053 867 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Trim6Q8BGE7 488 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 SncbQ91ZZ3 133 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Nop2Q922K7 793 aaKnown RBP11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ubxn1Q922Y1 297 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tnni2P13412 182 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ssh2Q5SW75 1423 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Exoc3l2D3YUP5 789 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Eftud2O08810 971 aaKnown RBP11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Chpf2Q3UU43 768 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ctdp1Q7TSG2 960 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tex35Q14BK3 207 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Rbbp8nlA2ABX0 614 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ankrd40Q5SUE8 363 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Mybpc2Q5XKE0 1136 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ift74Q8BKE9 600 aa11.53□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Dnajc21E9Q8D0 531 aa11.52□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Tacc3Q9JJ11 631 aa11.52□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Ak2Q9WTP6 239 aa11.52□□□□□ -0.56
Ubr1-201ENSMUST00000028728 Kmt5bQ3U8K7 883 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Hs2st1Q8R3H7 356 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Znf704Q9ERQ3 566 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Rapgef6Q5NCJ1 1609 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Arhgef18Q6P9R4 1021 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Golim4Q8BXA1 655 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Fam186bD3Z420 943 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Cnnm2Q3TWN3 875 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Naa25Q8BWZ3 972 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Sall3Q62255 1320 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Atp6v1aP50516 617 aaKnown RBP11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Fmnl3Q6ZPF4 1028 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Eif2aQ8BJW6 581 aaKnown RBP11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Hsf2bpQ9D4G2 338 aa11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 SsbP32067 415 aaKnown RBP11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gigyf2Q6Y7W8 1291 aaKnown RBP11.52□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Sirt1Q923E4 737 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Galntl5Q9D4M9 431 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Aplp1Q03157 653 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Ssrp1Q08943 708 aaKnown RBP11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Zswim4Q8C7B8 1101 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Snd1Q78PY7 910 aaKnown RBP11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Vps16Q920Q4 839 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 EmbP21995 330 aa11.51□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Q8BZJ8 459 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms