RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ZDHHC21Q8IVQ6 265 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 UBQLNLQ8IYU4 475 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 SLCO4A1Q96BD0 722 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 C14orf79Q96F83 325 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 PRRC1Q96M27 445 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 OR11A1Q9GZK7 315 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 POLR2J2Q9GZM3 115 aaKnown RBP16.73■□□□□ 0.27
PNKP-224ENST00000631020 PRDM14Q9GZV8 571 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 POLR2J3Q9H1A7 115 aaKnown RBP16.73■□□□□ 0.27
PNKP-224ENST00000631020 C12orf10Q9HB07 376 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 RHCGQ9UBD6 479 aa16.73■□□□□ 0.27
PNKP-224ENST00000631020 TACC2O95359 2948 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 A0A087WUJ7 227 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 A0A0J9YW62 118 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 DHRS12A0PJE2 317 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 OR5F1O95221 314 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 FABP3P05413 133 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 UMPSP11172 480 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 IGFBP2P18065 325 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 SSTR2P30874 369 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 MAGEA2P43356 314 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 CHRNB3Q05901 458 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 TFF3Q07654 80 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 KPNB1Q14974 876 aaKnown RBP16.72■□□□□ 0.27
PNKP-224ENST00000631020 FAM98BQ52LJ0 330 aaKnown RBP16.72■□□□□ 0.27
PNKP-224ENST00000631020 RTL6Q6ICC9 239 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 C3orf33Q6P1S2 294 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 PIWIL3Q7Z3Z3 882 aaKnown RBP16.72■□□□□ 0.27
PNKP-224ENST00000631020 NKAIN4Q8IVV8 208 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 RNF217Q8TC41 542 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 POP5Q969H6 163 aaKnown RBP16.72■□□□□ 0.27
PNKP-224ENST00000631020 RSRC1Q96IZ7 334 aaKnown RBP16.72■□□□□ 0.27
PNKP-224ENST00000631020 ARL5BQ96KC2 179 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 KCNJ16Q9NPI9 418 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 MAN2C1Q9NTJ4 1040 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 AURKCQ9UQB9 309 aa16.72■□□□□ 0.27
PNKP-224ENST00000631020 IGKV1D-42A0A075B6H8 117 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 ELOA3DA6NLF2 546 aaPredicted RBP16.71■□□□□ 0.27
PNKP-224ENST00000631020 ADAMDEC1O15204 470 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 SEC14L5O43304 696 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 ZNF208O43345 1280 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 CHP2O43745 196 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 GPIP06744 558 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 GLI4P10075 376 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 PNMTP11086 282 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 RHCEP18577 417 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 EGR4Q05215 589 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 FOXD4Q12950 439 aaPredicted RBP16.71■□□□□ 0.27
PNKP-224ENST00000631020 ELOA3BQ3SY89 546 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 SYT14P1Q58G82 188 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 C1orf185Q5T7R7 199 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 P3H2Q8IVL5 708 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 ZNF295-AS1Q8N0V1 137 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 ELOA3Q8NG57 546 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 ADGRG7Q96K78 797 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 NMNAT1Q9HAN9 279 aaPredicted RBP16.71■□□□□ 0.27
PNKP-224ENST00000631020 CAMK2AQ9UQM7 478 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 INTS1Q8N201 2190 aaKnown RBP16.71■□□□□ 0.27
PNKP-224ENST00000631020 PDZD2O15018 2839 aa16.71■□□□□ 0.27
PNKP-224ENST00000631020 A0A1W2PNR3 127 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 NPIPB7O75200 414 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 TOXO94900 526 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 RAP2AP10114 183 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ITGA2P17301 1181 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 PTNP21246 168 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 MAP2K6P52564 334 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ACTR3P61158 418 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 OFCC1Q8IZS5 231 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 SLC25A43Q8WUT9 341 aaPredicted RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 KLHL15Q96M94 604 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 PIP5K1AQ99755 562 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ZNF426Q9BUY5 554 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 FNDC11Q9BVV2 318 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 CHID1Q9BWS9 393 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 DENND2DQ9H6A0 471 aaPredicted RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 COQ10BQ9H8M1 238 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 CCM2LQ9NUG4 571 aaPredicted RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 SELENONQ9NZV5 590 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 STOML1Q9UBI4 398 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 FAM32AQ9Y421 112 aaKnown RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 CSMD2Q7Z408 3487 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 AHRRA9YTQ3 701 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 EIF1AYO14602 144 aaKnown RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 TNFSF11O14788 317 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 TFPIP10646 304 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 THRBP10828 461 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ST3GAL3Q11203 375 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 SF3B4Q15427 424 aaKnown RBP eCLIP16.7■□□□□ 0.264e-8■■■■□ 20.8
PNKP-224ENST00000631020 RIPPLY2Q5TAB7 128 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ESPNLQ6ZVH7 1005 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 CYP4Z1Q86W10 505 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 CCDC71Q8IV32 467 aaPredicted RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 PAPD5Q8NDF8 572 aaKnown RBP16.7■□□□□ 0.26
PNKP-224ENST00000631020 PIK3C3Q8NEB9 887 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 OR5B2Q96R09 309 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 TUBA1CQ9BQE3 449 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 RNPEPL1Q9HAU8 725 aa16.7■□□□□ 0.26
PNKP-224ENST00000631020 ALKBH4Q9NXW9 302 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms