RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 DUSP15Q9H1R2 295 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-204ENST00000543140 KLHL1Q9NR64 748 aa14.95□□□□□ -0.02
COL4A1-204ENST00000543140 SERTAD3Q9UJW9 196 aa14.95□□□□□ -0.02
COL4A1-204ENST00000543140 MKL2Q9ULH7 1088 aa14.95□□□□□ -0.02
COL4A1-204ENST00000543140 ATXN7L1Q9ULK2 861 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-204ENST00000543140 BAIAP2Q9UQB8 552 aa14.95□□□□□ -0.02
COL4A1-204ENST00000543140 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
COL4A1-204ENST00000543140 PCNX3Q9H6A9 2034 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 TTC36A6NLP5 189 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 J3QLW9 94 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 MAGEB4O15481 346 aaPredicted RBP14.94□□□□□ -0.02
COL4A1-204ENST00000543140 RNF13O43567 381 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SSX4O60224 188 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 IGKV3-11P04433 115 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF19P17023 458 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 RPTNQ6XPR3 784 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 TMEM91Q6ZNR0 172 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 MVB12AQ96EY5 273 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 DIRAS2Q96HU8 199 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SP140LQ9H930 580 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 TIGARQ9NQ88 270 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 COMMD3Q9UBI1 195 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ICAM5Q9UMF0 924 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 IGKV1D-42A0A075B6H8 117 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 LINC00854A0A1B0GVQ3 168 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ICOSLGO75144 302 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 OR12D2P58182 307 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SKP2Q13309 424 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 BIKQ13323 160 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SHBQ15464 509 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 FNDC7Q5VTL7 733 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 AGAP7PQ5VUJ5 663 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ARL9Q6T311 187 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 FAM131AQ6UXB0 335 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SSX6Q7RTT6 188 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ALPK2Q86TB3 2170 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 OR5W2Q8NH69 310 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 ADIPOR1Q96A54 375 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 TP53INP1Q96A56 240 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 CCDC74AQ96AQ1 378 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 DNAJA3Q96EY1 480 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 SLC41A2Q96JW4 573 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 C4orf36Q96KX1 117 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 FSCN3Q9NQT6 498 aa14.94□□□□□ -0.02
COL4A1-204ENST00000543140 BLOC1S5-TXNDC5H3BN57 136 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF264O43296 627 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 NR0B1P51843 470 aaKnown RBP14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ERVK-25P63136 954 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 GPLD1P80108 840 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF85Q03923 595 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ELAVL1Q15717 326 aaKnown RBP14.93□□□□□ -0.02
COL4A1-204ENST00000543140 BAK1Q16611 211 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ARMC4Q5T2S8 1044 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 WBP2NLQ6ICG8 309 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 GDPD3Q7L5L3 318 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 TMPRSS9Q7Z410 1059 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 NMNAT3Q96T66 252 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 CTSFQ9UBX1 484 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZMIZ1Q9ULJ6 1067 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 TCRBV16S1A1N1A0A5B0 115 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 FOSL2P15408 326 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 NAA10P41227 235 aaPredicted RBP14.93□□□□□ -0.02
COL4A1-204ENST00000543140 DHPSP49366 369 aaPredicted RBP14.93□□□□□ -0.02
COL4A1-204ENST00000543140 E2F1Q01094 437 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 SLC3A1Q07837 685 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 DDI2Q5TDH0 399 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 LANCL3Q6ZV70 420 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 C9orf40Q8IXQ3 194 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF440Q8IYI8 595 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 FAM71CQ8NEG0 241 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 MOSPD2Q8NHP6 518 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZPLD1Q8TCW7 415 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ZNRF4Q8WWF5 429 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 RASD2Q96D21 266 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 WDFY2Q96P53 400 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 ELF4Q99607 663 aaPredicted RBP14.93□□□□□ -0.02
COL4A1-204ENST00000543140 CCDC32Q9BV29 185 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 HOXD1Q9GZZ0 328 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 TRIM36Q9NQ86 728 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 PRDM6Q9NQX0 595 aa14.93□□□□□ -0.02
COL4A1-204ENST00000543140 MN1Q10571 1320 aaPredicted RBP14.92□□□□□ -0.02
COL4A1-204ENST00000543140 CPED1A4D0V7 1026 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 FRG2CA6NGY1 282 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 C4orf47A7E2U8 309 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 ATP6V1G1O75348 118 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 OR7A10O76100 309 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 PTTG1O95997 202 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 MT-ND5P03915 603 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 MST1P26927 711 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 DEFA1P59665 94 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 DEFA3P59666 94 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 CDC20Q12834 499 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 POMZP3Q6PJE2 187 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF501Q96CX3 271 aaPredicted RBP14.92□□□□□ -0.02
COL4A1-204ENST00000543140 MOGAT1Q96PD6 335 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 VN1R1Q9GZP7 353 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 CPNE5Q9HCH3 593 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 ASB6Q9NWX5 421 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 ZNF337Q9Y3M9 751 aa14.92□□□□□ -0.02
COL4A1-204ENST00000543140 FRYLO94915 3013 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms