RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CHRNA7P36544 502 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 HSD17B2P37059 387 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CSRP3P50461 194 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 B3GALT5-AS1P59052 145 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CRADDP78560 199 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PMP22Q01453 160 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 HSPA14Q0VDF9 509 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ABRQ12979 859 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ARHGAP19Q14CB8 494 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 NCF4Q15080 339 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZIC1Q15915 447 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANKRD20A4Q4UJ75 823 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 TCTE1Q5JU00 501 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CTSL3PQ5NE16 218 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PTRHD1Q6GMV3 140 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 NEPROQ6NW34 567 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 TTC23LQ6PF05 361 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CDHR3Q6ZTQ4 885 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CENPUQ71F23 418 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 OTOAQ7RTW8 1153 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC16A9Q7RTY1 509 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PCGF5Q86SE9 256 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 HOOK3Q86VS8 718 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMEM126BQ8IUX1 230 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF595Q8IYB9 648 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC35F6Q8N357 371 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 RAB42Q8N4Z0 105 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2A1Q8NGT9 310 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 CFAP61Q8NHU2 1237 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 C9orf43Q8TAL5 461 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 LKAAEAR1Q8TD35 194 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAGOHBQ96A72 148 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 LRRC39Q96DD0 335 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 GIMAP5Q96F15 307 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 FOPNLQ96NB1 174 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 RUNDC3BQ96NL0 473 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SERPINB12Q96P63 405 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 GBP5Q96PP8 586 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 NAT9Q9BTE0 207 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 LAT2Q9GZY6 243 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 WNT5BQ9H1J7 359 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC26A1Q9H2B4 701 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ACTL8Q9H568 366 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 XKR8Q9H6D3 395 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM60AQ9NP50 221 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SDR39U1Q9NRG7 319 aaPredicted RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SERINC1Q9NRX5 453 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SOHLH2Q9NX45 425 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPHK1Q9NYA1 384 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 HAO2Q9NYQ3 351 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 FLRT3Q9NZU0 649 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPATA7Q9P0W8 599 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANKMY1Q9P2S6 941 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 RNF14Q9UBS8 474 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PCYOX1Q9UHG3 505 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZDHHC2Q9UIJ5 367 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 PLCL2Q9UPR0 1127 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 DHRS7Q9Y394 339 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 MRPS18BQ9Y676 258 aaKnown RBP3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM169AQ9Y6X4 670 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 ICE1Q9Y2F5 2266 aa3.18□□□□□ -1.9
CKS1BP3-201ENST00000600888 HECTD1Q9ULT8 2610 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ARHGEF33A8MVX0 844 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMEM150CB9EJG8 249 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 C9J4A7 227 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 E5RI56 91 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCDC188H7C350 402 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 GFYI3L273 518 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 NDC80O14777 642 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 HCRTR1O43613 425 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KIF5CO60282 957 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLHL41O60662 606 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 NIPSNAP2O75323 286 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLF7O75840 302 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2B3O76000 313 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CGAP01215 116 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 IGLV1-44P01699 117 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 CATP04040 527 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 DANCRP0C864 163 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRKAR1AP10644 381 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PVRP15151 417 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF26P17031 533 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PGAM1P18669 254 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAGP20916 626 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 WNT5AP41221 380 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 DCDP81605 110 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRDX1Q06830 199 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 ILF2Q12905 390 aaKnown RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLRB1Q12918 225 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PTK6Q13882 451 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 MORF4L2Q15014 288 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 P2RY6Q15077 328 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 TRIP13Q15645 432 aaPredicted RBP3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLHL38Q2WGJ6 581 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 DEFB109BQ30KR1 87 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 TTLL9Q3SXZ7 439 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 GTDC1Q4AE62 458 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 PHLDA2Q53GA4 152 aa3.17□□□□□ -1.9
CKS1BP3-201ENST00000600888 LACTB2Q53H82 288 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms