RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PTPRAP18433 802 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FSHRP23945 695 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LIPAP38571 399 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 KIR3DL1P43629 444 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RFX3P48380 749 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TNFSF10P50591 281 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CRYBA4P53673 196 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 AQP5P55064 265 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLC37A1P57057 533 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ST8SIA6P61647 398 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RANP62826 216 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FAM3AP98173 230 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FPGSQ05932 587 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 AESQ08117 197 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SIGLEC14Q08ET2 396 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PTP4A2Q12974 167 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SRSF6Q13247 344 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PNOCQ13519 176 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLBPQ14493 270 aaKnown RBP eCLIP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HLFQ16534 295 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HYAL4Q2M3T9 481 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TIMM50Q3ZCQ8 353 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLC36A2Q495M3 483 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLC22A6Q4U2R8 563 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 AGKQ53H12 422 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TMEM41BQ5BJD5 291 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 NKAPLQ5M9Q1 402 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FAM74A1Q5RGS3 127 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 XAF1Q6GPH4 301 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 STEAP1BQ6NZ63 245 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SMARCD3Q6STE5 483 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ATRAIDQ6UW56 229 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 KCTD1Q719H9 257 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 GAREM2Q75VX8 874 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CHMP1BQ7LBR1 199 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LINC01551Q86U37 167 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CLEC10AQ8IUN9 316 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SIRT2Q8IXJ6 389 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 REPS2Q8NFH8 660 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DNERQ8NFT8 737 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR4C5Q8NGB2 326 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR56A1Q8NGH5 318 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR1K1Q8NGR3 316 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SPPL2BQ8TCT7 592 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 UBTD2Q8WUN7 234 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CCDC107Q8WV48 283 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SORCS1Q8WY21 1168 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CCDC74AQ96AQ1 378 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TMEM159Q96B96 161 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RPUSD4Q96CM3 377 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SMARCD1Q96GM5 515 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HARBI1Q96MB7 349 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HHIPQ96QV1 700 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TIMM29Q9BSF4 260 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LRFN3Q9BTN0 628 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TEX101Q9BY14 249 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FAM49AQ9H0Q0 323 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MED28Q9H204 178 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 BOLA2Q9H3K6 86 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PCIF1Q9H4Z3 704 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LMAN1LQ9HAT1 526 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LHX9Q9NQ69 397 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ASAH2Q9NR71 780 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 IL17RBQ9NRM6 502 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 UBP1Q9NZI7 540 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 STEAP1Q9UHE8 339 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RASD1Q9Y272 281 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OAS3Q9Y6K5 1087 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MYH2Q9UKX2 1941 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 TRAV8-7A0A075B6U6 113 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ELOVL7A1L3X0 281 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ANKRD61A6NGH8 418 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 WTIPA6NIX2 430 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 RFXAPO00287 272 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 IGSF6O95976 241 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 GCGP01275 180 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 NMBP08949 121 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ALDOCP09972 364 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SPATA31C1P0DKV0 1188 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 HKR1P10072 659 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ZNF44P15621 663 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ACO1P21399 889 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 COMTP21964 271 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 OR2B8PP59922 312 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 MAXP61244 160 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ADARB1P78563 741 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 MS4A2Q01362 244 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SKP2Q13309 424 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 MPP2Q14168 576 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 PRPSAP1Q14558 356 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 SHHQ15465 462 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 ZBTB6Q15916 424 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 KCTD19Q17RG1 926 aaPredicted RBP4.78□□□□□ -1.64
UBE4A-203ENST00000545354 QRICH1Q2TAL8 776 aa4.78□□□□□ -1.64
UBE4A-203ENST00000545354 PRTGQ2VWP7 1150 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms