RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PRODH2Q9UF12 536 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 FER1L5A0AVI2 2057 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 TMEM265A0A087WTH1 108 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 IL1AP01583 271 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 GUSBP08236 651 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 HPGDP15428 266 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 RBM34P42696 430 aaKnown RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 CCR4P51679 360 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 PSMD4P55036 377 aaKnown RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 SLC37A1P57057 533 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 COPZ1P61923 177 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 PPP1R14BQ96C90 147 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 ERMAPQ96PL5 475 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 SDHCQ99643 169 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 ALG8Q9BVK2 526 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 SLC35A3Q9Y2D2 325 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 CLCA3PQ9Y6N3 262 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 DAPL1A0PJW8 107 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 CDC14CA4D256 554 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 OIP5O43482 229 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 NUDT21O43809 227 aaKnown RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 GMFGO60234 142 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 EFNA3P52797 238 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 MADCAM1Q13477 382 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 CD226Q15762 336 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 PLXDC1Q8IUK5 500 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 GHDCQ8N2G8 530 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 SDR16C5Q8N3Y7 309 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 ATP6V1C2Q8NEY4 427 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 OR5M3Q8NGP4 307 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 OR52N1Q8NH53 320 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 ASB15Q8WXK1 588 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 GAL3ST4Q96RP7 486 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 NEURL2Q9BR09 285 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 NRSN2Q9GZP1 204 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 MARCH7Q9H992 704 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 PLEKHB1Q9UF11 243 aaPredicted RBP14.99□□□□□ -0.01
COL4A1-204ENST00000543140 GMEB2Q9UKD1 530 aa14.99□□□□□ -0.01
COL4A1-204ENST00000543140 CD8B2A6NJW9 211 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 DUX1O43812 170 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CD8BP10966 210 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF3P17036 446 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ETV6P41212 452 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 PI4KAP42356 2102 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CXCL12P48061 93 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CD300CQ08708 224 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 KLHL26Q53HC5 615 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 TSSK4Q6SA08 328 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 MINDY2Q8NBR6 621 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 NLGN4YQ8NFZ3 816 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 OR52E2Q8NGJ4 325 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 OR4K13Q8NH42 304 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 PHOSPHO1Q8TCT1 267 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 DNASE2BQ8WZ79 361 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 TIMP4Q99727 224 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 KATNB1Q9BVA0 655 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CHRNA10Q9GZZ6 450 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 EVA1AQ9H8M9 152 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 GSTK1Q9Y2Q3 226 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ISPDA4D126 451 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CCDC182A6NF36 153 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 EFCAB7A8K855 629 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 DVL2O14641 736 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 DLGAP3O95886 979 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 PEPDP12955 493 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 HK1P19367 917 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 AZGP1P25311 298 aaKnown RBP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 SLC6A6P31641 620 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 FOXL2P58012 376 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 PSPHP78330 225 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 VASNQ6EMK4 673 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CBLN3Q6UW01 205 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 APOOLQ6UXV4 268 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 TMPRSS11AQ6ZMR5 421 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 Q7L0L9 218 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CMIPQ8IY22 773 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 GPR135Q8IZ08 494 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CADM3Q8N126 398 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 OR51L1Q8NGJ5 315 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 PELOQ9BRX2 385 aaKnown RBP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 NDC1Q9BTX1 674 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ABCB9Q9NP78 766 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 MKKSQ9NPJ1 570 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 ADAM18Q9Y3Q7 739 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 SIRT4Q9Y6E7 314 aaPredicted RBP14.98□□□□□ -0.01
COL4A1-204ENST00000543140 CACNA1EQ15878 2313 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 COL6A3P12111 3177 aa14.98□□□□□ -0.01
COL4A1-204ENST00000543140 C2orf92A0A1B0GVN3 265 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 MCIDASD6RGH6 385 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 K7ESF4 209 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 SPNP16150 400 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 GLB1P16278 677 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 OR8H2Q8N162 312 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 SDR9C7Q8NEX9 313 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 SLC2A12Q8TD20 617 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 C3orf49Q96BT1 292 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 SGTBQ96EQ0 304 aa14.97□□□□□ -0.01
COL4A1-204ENST00000543140 ADOQ96SZ5 270 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms