RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PRSS58Q8IYP2 241 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 SLC25A45Q8N413 288 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 KLHL36Q8N4N3 616 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 SLC37A3Q8NCC5 494 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 SMAP2Q8WU79 429 aaPredicted RBP15.02■□□□□ -0
COL4A1-204ENST00000543140 DCLRE1CQ96SD1 692 aaKnown RBP15.02■□□□□ -0
COL4A1-204ENST00000543140 OR8D2Q9GZM6 311 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 PCED1AQ9H1Q7 454 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 LRRN3Q9H3W5 708 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 LANCL2Q9NS86 450 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 CRNNQ9UBG3 495 aaPredicted RBP15.02■□□□□ -0
COL4A1-204ENST00000543140 WNT16Q9UBV4 365 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 ZNF229Q9UJW7 825 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 FBXL4Q9UKA2 621 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 PCDHGB6Q9Y5F9 930 aa15.02■□□□□ -0
COL4A1-204ENST00000543140 A0A1B0GVT2 93 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 C12orf71A8MTZ7 269 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 BCAT2O15382 392 aaPredicted RBP15.02□□□□□ -0.01
COL4A1-204ENST00000543140 HCN1O60741 890 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 IGHA1P01876 353 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 GYPBP06028 91 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 MSL3P1P0C860 447 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 HNRNPA0Q13151 305 aaKnown RBP15.02□□□□□ -0.01
COL4A1-204ENST00000543140 INSL4Q14641 139 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 MED25Q71SY5 747 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 CCDC190Q86UF4 302 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 KLBQ86Z14 1044 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 GID4Q8IVV7 300 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 LRRC17Q8N6Y2 441 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 TMEM99Q8N816 258 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 LSMEM1Q8N8F7 131 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 PSD4Q8NDX1 1056 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 PTPMT1Q8WUK0 201 aaPredicted RBP15.02□□□□□ -0.01
COL4A1-204ENST00000543140 HDHD5Q9BXW7 423 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 CHRDQ9H2X0 955 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 EPHA6Q9UF33 1036 aa15.02□□□□□ -0.01
COL4A1-204ENST00000543140 SERINC4A6NH21 518 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 SAGE2PA6NJ88 616 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 PRR23D1E9PI22 279 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 SOX1O00570 391 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 MRPL3P09001 348 aaKnown RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 PRR23D2P0DMB1 279 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 HSD11B2P80365 405 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 RUNX1T1Q06455 604 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF362Q5T0B9 420 aaPredicted RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ULK3Q6PHR2 472 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF550Q7Z398 422 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 LAX1Q8IWV1 398 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 SLC35F3Q8IY50 421 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 POC5Q8NA72 575 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 OR4C6Q8NH72 309 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 HTRA1Q92743 480 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 KCTD7Q96MP8 289 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF426Q9BUY5 554 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 MCCC2Q9HCC0 563 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 CMC2Q9NRP2 79 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 WDR70Q9NW82 654 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 A0A0C4DFX4 3053 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 A0A075B6Q4 140 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 LOC110117498-PIK3R3F6TDL0 507 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 GABRA5P31644 462 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 AFF3P51826 1226 aaKnown RBP15.01□□□□□ -0.01
COL4A1-204ENST00000543140 CAV3P56539 151 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 SERTAD2Q14140 314 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 CRMP1Q14194 572 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF181Q2M3W8 571 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 RPL13AP3Q6NVV1 102 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 ZSCAN1Q8NBB4 408 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 OR10H4Q8NGA5 316 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 OR1L3Q8NH93 324 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 C14orf119Q9NWQ9 140 aa15.01□□□□□ -0.01
COL4A1-204ENST00000543140 RIIAD1A6NNX1 92 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 FOLR1P15328 257 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 CSF2RBP32927 897 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 EPHA4P54764 986 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 FHL1Q13642 323 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 GXYLT1Q4G148 440 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF322Q6U7Q0 402 aaPredicted RBP15□□□□□ -0.01
COL4A1-204ENST00000543140 QSOX2Q6ZRP7 698 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 TMEM151BQ8IW70 566 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 ACBD7Q8N6N7 88 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 KISS1RQ969F8 398 aaPredicted RBP15□□□□□ -0.01
COL4A1-204ENST00000543140 SLC25A46Q96AG3 418 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 ZNF578Q96N58 590 aaPredicted RBP15□□□□□ -0.01
COL4A1-204ENST00000543140 TEAD3Q99594 435 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 RAB33BQ9H082 229 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 FN3KQ9H479 309 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 ISYNA1Q9NPH2 558 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 H3BMH7 237 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 J3QRE1 110 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 AKAP8O43823 692 aaKnown RBP15□□□□□ -0.01
COL4A1-204ENST00000543140 VWA2Q5GFL6 755 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 C1orf189Q5VU69 101 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 DESI1Q6ICB0 168 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 LINC00114Q6XXX2 140 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 RTL4Q6ZR62 310 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 PRR22Q8IZ63 422 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 CAMKK1Q8N5S9 505 aa15□□□□□ -0.01
COL4A1-204ENST00000543140 NXF5Q9H1B4 397 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms