RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SPATA31C1P0DKV0 1188 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 MAOAP21397 527 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 ADAM8P78325 824 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 GNMTQ14749 295 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 SURF1Q15526 300 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 PRRT3Q5FWE3 981 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 LDLRAD2Q5SZI1 272 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 TMEM104Q8NE00 496 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 STAG3L4Q8TBR4 150 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 VAMP8Q9BV40 100 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF341Q9BYN7 854 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 NID2Q14112 1375 aa8.46□□□□□ -1.06
GTF2A1-203ENST00000553612 A6NIZ1 184 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 B4GALT3O60512 393 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 IL1AP01583 271 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SFTPBP07988 381 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 FPR1P21462 350 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 CD34P28906 385 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF41P51814 821 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ELAVL2Q12926 359 aaKnown RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 CYB5RLQ6IPT4 315 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 TSSK4Q6SA08 328 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 DBF4BQ8NFT6 615 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 OR52B4Q8NGK2 314 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 UBTD2Q8WUN7 234 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ARL15Q9NXU5 204 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 KLHL9Q9P2J3 617 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 A4GNTQ9UNA3 340 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ADAMTS12P58397 1594 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 RAB36O95755 333 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 HLA-DPB1P04440 258 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 STAG3L2P0CL84 134 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 AGTR2P50052 363 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 DLX5P56178 289 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 HSF1Q00613 529 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ST3GAL2Q16842 350 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PAGE3Q5JUK9 113 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 RIPPLY2Q5TAB7 128 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NOTUMQ6P988 496 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PRSS45Q7RTY3 260 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 BCDIN3DQ7Z5W3 292 aaKnown RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC35G3Q8N808 338 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PTPN18Q99952 460 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SLCO5A1Q9H2Y9 848 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF552Q9H707 407 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 TAS2R8Q9NYW2 309 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 FBXO7Q9Y3I1 522 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ECI2O75521 394 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 GPX5O75715 221 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PGAM2P15259 253 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PTPRNQ16849 979 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 IFI44LQ53G44 452 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 C3orf38Q5JPI3 329 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 FAAP20Q6NZ36 180 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NHLRC1Q6VVB1 395 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NKAIN4Q8IVV8 208 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SMIM12Q96EX1 92 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 BTF3L4Q96K17 158 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SYNPO2LQ9H987 977 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 UBTD1Q9HAC8 227 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 FBLL1A6NHQ2 334 aaKnown RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 MPTX1A8MV57 137 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 GRK6P43250 576 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 GBX1Q14549 363 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC22A10Q63ZE4 541 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 XYLT1Q86Y38 959 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 DTWD1Q8N5C7 304 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 HJURPQ8NCD3 748 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 OR56B4Q8NH76 319 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF670Q9BS34 389 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 PCDHA10Q9Y5I2 948 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 EFCAB6Q5THR3 1501 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 BCL9O00512 1426 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NME6O75414 186 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NXPH2O95156 264 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 KCNK5O95279 499 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NSA2O95478 260 aaKnown RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SSPNQ14714 243 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF484Q5JVG2 852 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 OR4F3Q6IEY1 312 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 NDUFAF7Q7L592 441 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 KCNRGQ8N5I3 272 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 GPR119Q8TDV5 335 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 ZNF582Q96NG8 517 aaPredicted RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 WFIKKN1Q96NZ8 548 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 SLC35D1Q9NTN3 355 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 RALYQ9UKM9 306 aaKnown RBP8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 CNTN6Q9UQ52 1028 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 QRICH2Q9H0J4 1663 aa8.45□□□□□ -1.06
GTF2A1-203ENST00000553612 FAM159BA6NKW6 160 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms