RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 SLC30A8Q8IWU4 369 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 ZNF440Q8IYI8 595 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 RPRMLQ8N4K4 120 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 GPR119Q8TDV5 335 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 CA5BP1Q8WTZ4 195 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 SLC38A5Q8WUX1 472 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 TMEM234Q8WY98 164 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 SDCCAG3Q96C92 435 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 TMEM19Q96HH6 336 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 CGREF1Q99674 301 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 TM9SF2Q99805 663 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 TREX2Q9BQ50 279 aaPredicted RBP10.71□□□□□ -0.69
VPS52-213ENST00000461743 SPATA9Q9BWV2 254 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 ARMC7Q9H6L4 198 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 CHST11Q9NPF2 352 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.71□□□□□ -0.69
VPS52-213ENST00000461743 RNF6Q9Y252 685 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 IFT52Q9Y366 437 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 ZNF175Q9Y473 711 aa10.71□□□□□ -0.69
VPS52-213ENST00000461743 CELSR2Q9HCU4 2923 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 GJE1A6NN92 205 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 CLCA1A8K7I4 914 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 C5orf58C9J3I9 102 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 H3BML4 177 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 NTN1O95631 604 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 IL2RAP01589 272 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 C1QCP02747 245 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 FCGR2AP12318 317 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 ETS2P15036 469 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 IL7RP16871 459 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 PRKCAP17252 672 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 CEACAM8P31997 349 aaPredicted RBP10.7□□□□□ -0.7
VPS52-213ENST00000461743 CCR4P51679 360 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 EEF1A1P68104 462 aaKnown RBP10.7□□□□□ -0.7
VPS52-213ENST00000461743 PMPCAQ10713 525 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 FOXF1Q12946 379 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 LARS2Q15031 903 aaKnown RBP10.7□□□□□ -0.7
VPS52-213ENST00000461743 MAPK11Q15759 364 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 RUNDC3AQ59EK9 446 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 EEF1A1P5Q5VTE0 462 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 OR2A2Q6IF42 318 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 C3orf33Q6P1S2 294 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 ESPNLQ6ZVH7 1005 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 CHMP1BQ7LBR1 199 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 GGNQ86UU5 652 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 RETREG3Q86VR2 466 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 PCYOX1LQ8NBM8 494 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 BHLHE22Q8NFJ8 381 aaPredicted RBP10.7□□□□□ -0.7
VPS52-213ENST00000461743 WNT2BQ93097 391 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 RNF145Q96MT1 663 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 ANKRD27Q96NW4 1050 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 TRIB1Q96RU8 372 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 SH3GL1Q99961 368 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 TUBA1CQ9BQE3 449 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 DNAJB12Q9NXW2 375 aaKnown RBP10.7□□□□□ -0.7
VPS52-213ENST00000461743 ALKBH4Q9NXW9 302 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 SLAMF8Q9P0V8 285 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 ZNF337Q9Y3M9 751 aa10.7□□□□□ -0.7
VPS52-213ENST00000461743 A0A0G2JNJ9 132 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 CDHR4A6H8M9 788 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 DVL2O14641 736 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 OIP5O43482 229 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 GMFGO60234 142 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 IL18BPO95998 194 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 CRHP06850 196 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 UBTFL6P0CB48 400 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 TCEA1P23193 301 aaKnown RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 FKBP2P26885 142 aaKnown RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 HTR3AP46098 478 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 RBBP4Q09028 425 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 NFYCQ13952 458 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 CYLC2Q14093 348 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 QPRTQ15274 297 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 MMEL1Q495T6 779 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 PDSS1Q5T2R2 415 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 MRPL2Q5T653 305 aaKnown RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 REEP3Q6NUK4 255 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 SEM1Q6ZVN7 128 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 NCCRP1Q6ZVX7 275 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 OLIG3Q7RTU3 272 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 NET1Q7Z628 596 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 SERPINA11Q86U17 422 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 KRT73Q86Y46 540 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 OR8J3Q8NGG0 315 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 OR10Q1Q8NGQ4 319 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 LILRB4Q8NHJ6 448 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 POC1BQ8TC44 478 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 SLC25A43Q8WUT9 341 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 ADGRG7Q96K78 797 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 SPATA5L1Q9BVQ7 753 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 SFXN3Q9BWM7 321 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 QRSL1Q9H0R6 528 aaKnown RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 EVA1AQ9H8M9 152 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 ACER3Q9NUN7 267 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 ZNF629Q9UEG4 869 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 Q9UFV3 132 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 ANGPT4Q9Y264 503 aa10.69□□□□□ -0.7
VPS52-213ENST00000461743 ZNF443Q9Y2A4 671 aaPredicted RBP10.69□□□□□ -0.7
VPS52-213ENST00000461743 SPIN1Q9Y657 262 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms