RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 OR14A2Q96R54 314 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 SAP130Q9H0E3 1048 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 OR51E2Q9H255 320 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 CHRDQ9H2X0 955 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 CPNE5Q9HCH3 593 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 ZDHHC7Q9NXF8 308 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 HAO2Q9NYQ3 351 aa10.86□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF443Q9Y2A4 671 aaPredicted RBP10.86□□□□□ -0.67
LAMA4-201ENST00000230538 GABRR3A8MPY1 467 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 SMAD6O43541 496 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CYBAP13498 195 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 POU3F2P20265 443 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 HTR3AP46098 478 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 EEF1A1P68104 462 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 STK11Q15831 433 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 DESI1Q6ICB0 168 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF767PQ75MW2 155 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RHBDD1Q8TEB9 315 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 BPIFA2Q96DR5 249 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 HHIPQ96QV1 700 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 THAP7Q9BT49 309 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CENPBD1B2RD01 187 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 B4GAT1O43505 415 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 SRPX2O60687 465 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 LILRB3O75022 631 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RPS17P08708 135 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 GAAP10253 952 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 BDH1Q02338 343 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ACSM3Q53FZ2 586 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 LANCL3Q6ZV70 420 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF610Q8N9Z0 462 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RSC1A1Q92681 617 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 C1QTNF2Q9BXJ5 285 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 DDX31Q9H8H2 851 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CD300LBA8K4G0 201 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 OR2T1O43869 369 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CNMDO75829 334 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 HMGN2P05204 90 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 MAOBP27338 520 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 PTGER1P34995 402 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RAB40BQ12829 278 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 FGFBP1Q14512 234 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 IRF4Q15306 451 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 LPAL2Q16609 132 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 PLCXD3Q63HM9 321 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RNF128Q8TEB7 428 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 NT5C3BQ969T7 300 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 RTP3Q9BQQ7 232 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 KLF16Q9BXK1 252 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 LOC102725191A0A1B0GVB3 256 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 C1orf196B1AJZ1 125 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ARPC1BO15143 372 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 IFNA17P01571 189 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ALDOBP05062 364 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 TNFSF4P23510 183 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 MCATQ8IVS2 390 aaKnown RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 DTD2Q96FN9 168 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CDCA3Q99618 268 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 EMCNQ9ULC0 261 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF337Q9Y3M9 751 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 TRAV27A0A087WT01 109 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 FUOMA2VDF0 154 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 DVL2O14641 736 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 GDF1P27539 372 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 XCR1P46094 333 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF140P52738 457 aaPredicted RBP10.85□□□□□ -0.67
LAMA4-201ENST00000230538 SDSLQ96GA7 329 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 VAPAQ9P0L0 249 aa10.85□□□□□ -0.67
LAMA4-201ENST00000230538 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 PRAF2O60831 178 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 IDUAP35475 653 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 DYRK1AQ13627 763 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
LAMA4-201ENST00000230538 AGAP7PQ5VUJ5 663 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 ZNF765Q7L2R6 523 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 B3GNT8Q7Z7M8 397 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 FNDC9Q8TBE3 224 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 ISG20Q96AZ6 181 aaKnown RBP10.84□□□□□ -0.67
LAMA4-201ENST00000230538 AGAP4Q96P64 663 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 LMF2Q9BU23 707 aaKnown RBP10.84□□□□□ -0.67
LAMA4-201ENST00000230538 PDLIM7Q9NR12 457 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 C2orf72A6NCS6 295 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 HPGDSO60760 199 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 BCAS1O75363 584 aaPredicted RBP10.84□□□□□ -0.67
LAMA4-201ENST00000230538 CDK1P06493 297 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 CA3P07451 260 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 DBHP09172 617 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 ITGAMP11215 1152 aa10.84□□□□□ -0.67
LAMA4-201ENST00000230538 CXCR4P61073 352 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms