RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GANABQ14697 944 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 BCL2A1Q16548 175 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 SLC25A35Q3KQZ1 300 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 TTMPQ5BVD1 217 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 SPANXN4Q5MJ08 99 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MEX3BQ6ZN04 569 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MAVSQ7Z434 540 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 SPATA19Q7Z5L4 167 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 ANKRD46Q86W74 232 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 MBD3L2Q8NHZ7 208 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 ADAMTS15Q8TE58 950 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 UCN2Q96RP3 112 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 SERHL2Q9H4I8 314 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 PTGES2Q9H7Z7 377 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 UBQLN4Q9NRR5 601 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 AIG1Q9NVV5 245 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 GPR45Q9Y5Y3 372 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 DOCK7Q96N67 2140 aa16.73■□□□□ 0.27
SHKBP1-202ENST00000593764 TRPC5OSA6NMA1 111 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 SLCO1B7G3V0H7 640 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF195O14628 629 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 NDUFB5O43674 189 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 SOX30O94993 753 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 IL2RAP01589 272 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 IL12AP29459 219 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF136P52737 540 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 NME5P56597 212 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 CLDN15P56746 228 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 RCAN2Q14206 197 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 TMEM44Q2T9K0 475 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 ARSKQ6UWY0 536 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 PLXDC2Q6UX71 529 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 C6orf120Q7Z4R8 191 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 C9orf106Q8NAJ2 232 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 GATSQ8NAP1 163 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 RELL2Q8NC24 303 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 OR5M1Q8NGP8 315 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 CHMP6Q96FZ7 201 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 ATP6V1G3Q96LB4 118 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 OR7D2Q96RA2 312 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 SH3GL2Q99962 352 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF337Q9Y3M9 751 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 CSMD2Q7Z408 3487 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 CREBBPQ92793 2442 aa16.72■□□□□ 0.27
SHKBP1-202ENST00000593764 A0A1W2PQD3 144 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 OR2M5A3KFT3 312 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 CLCA1A8K7I4 914 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 E9PBE3 544 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 H0Y3Z8 333 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 GMFGO60234 142 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 KRT16P08779 473 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 H2AFXP16104 143 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 SOAT1P35610 550 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 CLNS1AP54105 237 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 DLX5P56178 289 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 RPS26P62854 115 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 CD226Q15762 336 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 DPY19L1Q2PZI1 675 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 FAM174BQ3ZCQ3 159 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 GLYR1Q49A26 553 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 SLC9B1Q4ZJI4 515 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 DCST2Q5T1A1 773 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 ANXA8L1Q5VT79 327 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 RAET1LQ5VY80 246 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 BHLHB9Q6PI77 547 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 GDF7Q7Z4P5 450 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 DMRTC2Q8IXT2 367 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 OR5D16Q8NGK9 328 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 KLHDC3Q9BQ90 382 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 CLCF1Q9UBD9 225 aa16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 ZNF629Q9UEG4 869 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-202ENST00000593764 NPIPA5A0A0B4J1W7 369 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 RNF103-CHMP3A0A140T963 221 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 C9JVG2 144 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 NPIPA7E9PJI5 369 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 NPIPB9F8W1W9 429 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 NPIPA8P0DM63 369 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 PEPDP12955 493 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 MATN1P21941 496 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 BMP5P22003 454 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 VPS37AQ8NEZ2 397 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 PIWIL2Q8TC59 973 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 MIPOL1Q8TD10 442 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 WNT2BQ93097 391 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 SDF2Q99470 211 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 NPAS1Q99742 590 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 PCDHGB4Q9UN71 923 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 MED12LQ86YW9 2145 aa16.7■□□□□ 0.26
SHKBP1-202ENST00000593764 PDZD2O15018 2839 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 SHISA8B8ZZ34 492 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 H0YC42 278 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 LINC01387J3KSC0 135 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 SYT5O00445 386 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 SCDO00767 359 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 HCRTR2O43614 444 aa16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 CPSF4O95639 269 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-202ENST00000593764 C1QCP02747 245 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms