RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 SLC45A3Q96JT2 553 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 QRFPRQ96P65 431 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRAPPC9Q96Q05 1148 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR52E6Q96RD3 313 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CDRT15Q96T59 188 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPAS1Q99742 590 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 HOPXQ9BPY8 73 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 KCTD14Q9BQ13 255 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC39A3Q9BRY0 314 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 MS4A8Q9BY19 250 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 LHPPQ9H008 270 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPNS1Q9H2V7 528 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR51B5Q9H339 312 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 DENND2DQ9H6A0 471 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 DCLRE1BQ9H816 532 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 COPS7BQ9H9Q2 264 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 EBF2Q9HAK2 575 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 WASH6PQ9NQA3 447 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 MIEF1Q9NQG6 463 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 C2orf42Q9NWW7 574 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 NDUFAF4Q9P032 175 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TAAR2Q9P1P5 351 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SPASTQ9UBP0 616 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TBC1D29Q9UFV1 150 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC7A8Q9UHI5 535 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 KCND3Q9UK17 655 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 ICAM5Q9UMF0 924 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 DLGAP4Q9Y2H0 992 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCL27Q9Y4X3 112 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CHD7Q9P2D1 2997 aa3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 TDRD6O60522 2096 aaKnown RBP3.55□□□□□ -1.84
HMGB3P20-201ENST00000417997 CHD9Q3L8U1 2897 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 A0A1W2PPV9 198 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 FEZF1A0PJY2 475 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 C2orf74A8MZ97 194 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TLR4O00206 839 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 FOXE1O00358 373 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SAP18O00422 153 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SYT5O00445 386 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 HSPB6O14558 160 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RFXANKO14593 260 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 HAT1O14929 419 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SCAMP2O15127 329 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 BCAT2O15382 392 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 AQP9O43315 295 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ENTPD5O75356 428 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 KRT36O76013 467 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ETHE1O95571 254 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CPSF4O95639 269 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 BAG2O95816 211 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 EML2O95834 649 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NPPAP01160 153 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANXA4P09525 319 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SLC35G6P0C7Q6 338 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 FCGR1AP12314 374 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 UGT2B7P16662 529 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NAGAP17050 411 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 XRCC1P18887 633 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 POLR2CP19387 275 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 BCKDHBP21953 392 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CDH3P22223 829 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 HRH2P25021 359 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 IL12AP29459 219 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 HNRNPH1P31943 449 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SOAT1P35610 550 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DPP6P42658 865 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SSR2P43308 183 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DHPSP49366 369 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ERFP50548 548 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 NUDT6P53370 316 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 MAPK12P53778 367 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ATXN3P54252 364 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ACTR3P61158 418 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 STXBP1P61764 594 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 HNRNPKP61978 463 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RPS15AP62244 130 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CSNK1G2P78368 415 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PLIN5Q00G26 463 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PRDX1Q06830 199 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RGS1Q08116 209 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 SIGLEC14Q08ET2 396 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 C2orf80Q0P641 193 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 LRRC74AQ0VAA2 488 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 KIR2DS3Q14952 304 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 RUNDC3AQ59EK9 446 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZNF628Q5EBL2 1059 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 PIGGQ5H8A4 983 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TOR1AIP1Q5JTV8 583 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CCNYL2Q5T2Q4 361 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 CPTPQ5TA50 214 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ANXA8L1Q5VT79 327 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 KHDRBS2Q5VWX1 349 aaKnown RBP3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 LYSMD4Q5XG99 296 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 DGAT2L7PQ6IED9 249 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ADNP2Q6IQ32 1131 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 ZFP1Q6P2D0 407 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 TRIM40Q6P9F5 258 aa3.54□□□□□ -1.84
HMGB3P20-201ENST00000417997 KLHL35Q6PF15 583 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms