RNA–Protein interactions for RNA: snR8

snR8, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR8, Length 190 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR8	snR8	CDC34	P14682	295 aa		3.48	□□□□□ -1.85
snR8	snR8	STE13	P33894	931 aa		3.48	□□□□□ -1.85
snR8	snR8	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
snR8	snR8	YKR078W	P36158	585 aa	Known RBP	3.48	□□□□□ -1.85
snR8	snR8	TSL1	P38427	1098 aa	Known RBP	3.48	□□□□□ -1.85
snR8	snR8	SNF7	P39929	240 aa	Known RBP	3.48	□□□□□ -1.85
snR8	snR8	MRPS35	P53292	345 aa		3.48	□□□□□ -1.85
snR8	snR8	SPO20	Q04359	397 aa		3.48	□□□□□ -1.85
snR8	snR8	ESC2	Q06340	456 aa		3.48	□□□□□ -1.85
snR8	snR8	SWM1	Q12379	170 aa		3.48	□□□□□ -1.85
snR8	snR8	ATE1	P16639	503 aa		3.47	□□□□□ -1.85
snR8	snR8	YBR053C	P38235	358 aa		3.47	□□□□□ -1.85
snR8	snR8	YJL163C	P46996	555 aa		3.47	□□□□□ -1.85
snR8	snR8	POL32	P47110	350 aa		3.47	□□□□□ -1.85
snR8	snR8	YKE2	P52553	114 aa		3.47	□□□□□ -1.85
snR8	snR8	CDC48	P25694	835 aa	Known RBP	3.46	□□□□□ -1.86
snR8	snR8	RPD3	P32561	433 aa		3.46	□□□□□ -1.86
snR8	snR8	YBR238C	P38330	731 aa	Known RBP	3.46	□□□□□ -1.86
snR8	snR8	RPP1	P38786	293 aa		3.46	□□□□□ -1.86
snR8	snR8	CTF8	P38877	133 aa		3.46	□□□□□ -1.86
snR8	snR8	MET10	P39692	1035 aa		3.46	□□□□□ -1.86
snR8	snR8	YGR053C	P53234	283 aa		3.46	□□□□□ -1.86
snR8	snR8	RIA1	P53893	1110 aa		3.46	□□□□□ -1.86
snR8	snR8	CRR1	Q05790	422 aa		3.46	□□□□□ -1.86
snR8	snR8	DUS3	Q06053	668 aa	Known RBP	3.46	□□□□□ -1.86
snR8	snR8	SCS3	P53012	380 aa		3.45	□□□□□ -1.86
snR8	snR8	PRP4	P20053	465 aa	Known RBP	3.44	□□□□□ -1.86
snR8	snR8	MBP1	P39678	833 aa		3.44	□□□□□ -1.86
snR8	snR8	YIL108W	P40483	696 aa	Known RBP	3.44	□□□□□ -1.86
snR8	snR8	NPP1	P25353	742 aa		3.43	□□□□□ -1.86
snR8	snR8	VPS30	Q02948	557 aa		3.43	□□□□□ -1.86
snR8	snR8	RMD1	Q03441	430 aa		3.43	□□□□□ -1.86
snR8	snR8	DMC1	P25453	334 aa		3.42	□□□□□ -1.86
snR8	snR8	ABD1	P32783	436 aa	Predicted RBP	3.42	□□□□□ -1.86
snR8	snR8	SLD2	P34252	453 aa		3.42	□□□□□ -1.86
snR8	snR8	GAT1	P43574	510 aa		3.42	□□□□□ -1.86
snR8	snR8	AMA1	P50082	593 aa		3.42	□□□□□ -1.86
snR8	snR8	APM1	Q00776	475 aa	Predicted RBP	3.42	□□□□□ -1.86
snR8	snR8	MRI1	Q06489	411 aa	Known RBP	3.42	□□□□□ -1.86
snR8	snR8	YUR1	P26725	428 aa		3.41	□□□□□ -1.86
snR8	snR8	PET112	P33893	541 aa		3.41	□□□□□ -1.86
snR8	snR8	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
snR8	snR8	PUS2	P53167	370 aa		3.41	□□□□□ -1.86
snR8	snR8	RRP15	Q06511	250 aa	Predicted RBP	3.41	□□□□□ -1.86
snR8	snR8	IRC13	Q08630	104 aa		3.41	□□□□□ -1.86
snR8	snR8	SPO11	P23179	398 aa		3.4	□□□□□ -1.87
snR8	snR8	AFR1	P33304	620 aa		3.4	□□□□□ -1.87
snR8	snR8	CBR1	P38626	284 aa	Known RBP	3.4	□□□□□ -1.87
snR8	snR8	GGA2	P38817	585 aa	Known RBP	3.4	□□□□□ -1.87
snR8	snR8	DAM1	P53267	343 aa		3.4	□□□□□ -1.87
snR8	snR8	SGO1	Q08490	590 aa		3.4	□□□□□ -1.87
snR8	snR8	EMP70	P32802	667 aa		3.39	□□□□□ -1.87
snR8	snR8	ORC2	P32833	620 aa		3.39	□□□□□ -1.87
snR8	snR8	YHR078W	P38799	552 aa		3.39	□□□□□ -1.87
snR8	snR8	VHR1	P40522	640 aa		3.39	□□□□□ -1.87
snR8	snR8	SSL2	Q00578	843 aa		3.39	□□□□□ -1.87
snR8	snR8	TYE7	P33122	291 aa	Predicted RBP	3.38	□□□□□ -1.87
snR8	snR8	YJL206C	P39529	758 aa		3.38	□□□□□ -1.87
snR8	snR8	HDA1	P53973	706 aa		3.38	□□□□□ -1.87
snR8	snR8	YKR011C	Q02209	353 aa		3.38	□□□□□ -1.87
snR8	snR8	TAF3	Q12297	353 aa		3.38	□□□□□ -1.87
snR8	snR8	YIR042C	P40586	236 aa		3.37	□□□□□ -1.87
snR8	snR8	CCT7	P42943	550 aa	Known RBP	3.37	□□□□□ -1.87
snR8	snR8	ASI2	P53895	289 aa		3.37	□□□□□ -1.87
snR8	snR8	SMX3	P54999	86 aa	Predicted RBP	3.37	□□□□□ -1.87
snR8	snR8	SBA1	P28707	216 aa	Known RBP	3.36	□□□□□ -1.87
snR8	snR8	PPH3	P32345	308 aa		3.36	□□□□□ -1.87
snR8	snR8	YEL020C	P39994	560 aa		3.36	□□□□□ -1.87
snR8	snR8	FMP52	P40008	231 aa		3.36	□□□□□ -1.87
snR8	snR8	CEP3	P40969	608 aa		3.36	□□□□□ -1.87
snR8	snR8	RIM13	Q03792	727 aa		3.36	□□□□□ -1.87
snR8	snR8	YDR306C	Q06640	478 aa		3.36	□□□□□ -1.87
snR8	snR8	RFA1	P22336	621 aa	Known RBP	3.35	□□□□□ -1.87
snR8	snR8	HIS7	P33734	552 aa	Known RBP	3.35	□□□□□ -1.87
snR8	snR8	MNR2	P35724	969 aa		3.35	□□□□□ -1.87
snR8	snR8	TEL2	P53038	688 aa		3.35	□□□□□ -1.87
snR8	snR8	PKH1	Q03407	766 aa		3.35	□□□□□ -1.87
snR8	snR8	ADE8	P04161	214 aa		3.34	□□□□□ -1.87
snR8	snR8	MPH2	P0CD99	609 aa		3.34	□□□□□ -1.87
snR8	snR8	HOM2	P13663	365 aa	Known RBP	3.34	□□□□□ -1.87
snR8	snR8	AGP1	P25376	633 aa		3.34	□□□□□ -1.87
snR8	snR8	BCD1	P38772	366 aa		3.34	□□□□□ -1.87
snR8	snR8	FAA4	P47912	694 aa	Known RBP	3.34	□□□□□ -1.87
snR8	snR8	HSV2	P50079	448 aa	Predicted RBP	3.34	□□□□□ -1.87
snR8	snR8	VPS16	Q03308	798 aa		3.34	□□□□□ -1.87
snR8	snR8	SEG1	Q04279	960 aa		3.34	□□□□□ -1.87
snR8	snR8	ASM4	Q05166	528 aa		3.34	□□□□□ -1.87
snR8	snR8	RPN13	O13563	156 aa		3.33	□□□□□ -1.88
snR8	snR8	LAT1	P12695	482 aa	Known RBP	3.33	□□□□□ -1.88
snR8	snR8	YRO2	P38079	344 aa		3.33	□□□□□ -1.88
snR8	snR8	BNA3	P47039	444 aa	Known RBP	3.33	□□□□□ -1.88
snR8	snR8	NRG1	Q03125	231 aa		3.33	□□□□□ -1.88
snR8	snR8	VPS34	P22543	875 aa		3.32	□□□□□ -1.88
snR8	snR8	URA1	P28272	314 aa	Predicted RBP	3.32	□□□□□ -1.88
snR8	snR8	RGT1	P32862	1170 aa		3.32	□□□□□ -1.88
snR8	snR8	ERT1	P38140	529 aa		3.32	□□□□□ -1.88
snR8	snR8	HOS4	P40480	1083 aa		3.32	□□□□□ -1.88
snR8	snR8	KRI1	P42846	591 aa	Known RBP	3.32	□□□□□ -1.88
snR8	snR8	BPL1	P48445	690 aa	Predicted RBP	3.32	□□□□□ -1.88
snR8	snR8	MUS81	Q04149	632 aa	Predicted RBP	3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms