RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 GFA1P14742 717 aaKnown RBP2.93□□□□□ -1.94
snR49snR49 NPP1P25353 742 aa2.93□□□□□ -1.94
snR49snR49 CDC48P25694 835 aaKnown RBP2.93□□□□□ -1.94
snR49snR49 RPD3P32561 433 aa2.93□□□□□ -1.94
snR49snR49 HOF1Q05080 669 aa2.93□□□□□ -1.94
snR49snR49 ICT1Q12385 394 aa2.93□□□□□ -1.94
snR49snR49 CAF20P12962 161 aaKnown RBP2.92□□□□□ -1.94
snR49snR49 GUS1P46655 708 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
snR49snR49 MUP1P50276 574 aa2.92□□□□□ -1.94
snR49snR49 MRPS35P53292 345 aa2.92□□□□□ -1.94
snR49snR49 OYE2Q03558 400 aaKnown RBP2.92□□□□□ -1.94
snR49snR49 YAP7Q08182 245 aa2.92□□□□□ -1.94
snR49snR49 SWM1Q12379 170 aa2.92□□□□□ -1.94
snR49snR49 YNL162W-AQ3E7A8 72 aa2.92□□□□□ -1.94
snR49snR49 PRP4P20053 465 aaKnown RBP2.91□□□□□ -1.94
snR49snR49 AFR1P33304 620 aa2.91□□□□□ -1.94
snR49snR49 MNR2P35724 969 aa2.91□□□□□ -1.94
snR49snR49 CTF8P38877 133 aa2.91□□□□□ -1.94
snR49snR49 FKH2P41813 862 aa2.91□□□□□ -1.94
snR49snR49 FAA4P47912 694 aaKnown RBP2.91□□□□□ -1.94
snR49snR49 HCA4P20448 770 aaKnown RBP2.9□□□□□ -1.95
snR49snR49 ILV6P25605 309 aaKnown RBP2.9□□□□□ -1.95
snR49snR49 RPP1P38786 293 aa2.9□□□□□ -1.95
snR49snR49 PCL5P38794 229 aa2.9□□□□□ -1.95
snR49snR49 YIL108WP40483 696 aaKnown RBP2.9□□□□□ -1.95
snR49snR49 THI7Q05998 598 aa2.9□□□□□ -1.95
snR49snR49 ARO10Q06408 635 aa2.9□□□□□ -1.95
snR49snR49 MET6P05694 767 aaKnown RBP2.89□□□□□ -1.95
snR49snR49 AGP1P25376 633 aa2.89□□□□□ -1.95
snR49snR49 SBA1P28707 216 aaKnown RBP2.89□□□□□ -1.95
snR49snR49 TMT1P32643 299 aa2.89□□□□□ -1.95
snR49snR49 YBR053CP38235 358 aa2.89□□□□□ -1.95
snR49snR49 VPS30Q02948 557 aa2.89□□□□□ -1.95
snR49snR49 YDR306CQ06640 478 aa2.89□□□□□ -1.95
snR49snR49 CDC43P18898 376 aa2.88□□□□□ -1.95
snR49snR49 KIN3P22209 435 aa2.88□□□□□ -1.95
snR49snR49 YJL163CP46996 555 aa2.88□□□□□ -1.95
snR49snR49 HDA1P53973 706 aa2.88□□□□□ -1.95
snR49snR49 CRR1Q05790 422 aa2.88□□□□□ -1.95
snR49snR49 ADE8P04161 214 aa2.87□□□□□ -1.95
snR49snR49 ADY2P25613 283 aa2.87□□□□□ -1.95
snR49snR49 HEM3P28789 327 aa2.87□□□□□ -1.95
snR49snR49 PPH3P32345 308 aa2.87□□□□□ -1.95
snR49snR49 VBA5P36172 582 aa2.87□□□□□ -1.95
snR49snR49 YIL166CP40445 542 aa2.87□□□□□ -1.95
snR49snR49 GDE1Q02979 1223 aa2.87□□□□□ -1.95
snR49snR49 TYE7P33122 291 aaPredicted RBP2.86□□□□□ -1.95
snR49snR49 YHR078WP38799 552 aa2.86□□□□□ -1.95
snR49snR49 CEP3P40969 608 aa2.86□□□□□ -1.95
snR49snR49 RIA1P53893 1110 aa2.86□□□□□ -1.95
snR49snR49 YKR011CQ02209 353 aa2.86□□□□□ -1.95
snR49snR49 IRC13Q08630 104 aa2.86□□□□□ -1.95
snR49snR49 FAL1Q12099 399 aaKnown RBP2.86□□□□□ -1.95
snR49snR49 RFA1P22336 621 aaKnown RBP2.85□□□□□ -1.95
snR49snR49 YRO2P38079 344 aa2.85□□□□□ -1.95
snR49snR49 ERT1P38140 529 aa2.85□□□□□ -1.95
snR49snR49 GGA2P38817 585 aaKnown RBP2.85□□□□□ -1.95
snR49snR49 VHR1P40522 640 aa2.85□□□□□ -1.95
snR49snR49 KRI1P42846 591 aaKnown RBP2.85□□□□□ -1.95
snR49snR49 AMA1P50082 593 aa2.85□□□□□ -1.95
snR49snR49 GLO1P50107 326 aa2.85□□□□□ -1.95
snR49snR49 VPS16Q03308 798 aa2.85□□□□□ -1.95
snR49snR49 AAR2P32357 355 aaPredicted RBP2.84□□□□□ -1.95
snR49snR49 ASI2P53895 289 aa2.84□□□□□ -1.95
snR49snR49 BUL2Q03758 920 aaKnown RBP2.84□□□□□ -1.95
snR49snR49 URA1P28272 314 aaPredicted RBP2.83□□□□□ -1.96
snR49snR49 CBR1P38626 284 aaKnown RBP2.83□□□□□ -1.96
snR49snR49 SIT1P39980 628 aa2.83□□□□□ -1.96
snR49snR49 SHE9Q04172 456 aa2.83□□□□□ -1.96
snR49snR49 EMP70P32802 667 aa2.82□□□□□ -1.96
snR49snR49 YKL069WP36088 180 aa2.82□□□□□ -1.96
snR49snR49 TOK1P40310 691 aa2.82□□□□□ -1.96
snR49snR49 YIR042CP40586 236 aa2.82□□□□□ -1.96
snR49snR49 CCM1P48237 864 aaPredicted RBP2.82□□□□□ -1.96
snR49snR49 SEC5P89102 971 aa2.82□□□□□ -1.96
snR49snR49 SSL2Q00578 843 aa2.82□□□□□ -1.96
snR49snR49 PKH1Q03407 766 aa2.82□□□□□ -1.96
snR49snR49 MUS81Q04149 632 aaPredicted RBP2.82□□□□□ -1.96
snR49snR49 ASM4Q05166 528 aa2.82□□□□□ -1.96
snR49snR49 SGO1Q08490 590 aa2.82□□□□□ -1.96
snR49snR49 MPH2P0CD99 609 aa2.81□□□□□ -1.96
snR49snR49 DMC1P25453 334 aa2.81□□□□□ -1.96
snR49snR49 ASF1P32447 279 aa2.81□□□□□ -1.96
snR49snR49 HIS7P33734 552 aaKnown RBP2.81□□□□□ -1.96
snR49snR49 CCT7P42943 550 aaKnown RBP2.81□□□□□ -1.96
snR49snR49 DAM1P53267 343 aa2.81□□□□□ -1.96
snR49snR49 APM1Q00776 475 aaPredicted RBP2.81□□□□□ -1.96
snR49snR49 TAF3Q12297 353 aa2.81□□□□□ -1.96
snR49snR49 RPS9AO13516 197 aaKnown RBP2.8□□□□□ -1.96
snR49snR49 LAT1P12695 482 aaKnown RBP2.8□□□□□ -1.96
snR49snR49 BCD1P38772 366 aa2.8□□□□□ -1.96
snR49snR49 YJL206CP39529 758 aa2.8□□□□□ -1.96
snR49snR49 FMP52P40008 231 aa2.8□□□□□ -1.96
snR49snR49 HOS4P40480 1083 aa2.8□□□□□ -1.96
snR49snR49 TEL2P53038 688 aa2.8□□□□□ -1.96
snR49snR49 DUS1P53759 423 aaKnown RBP2.8□□□□□ -1.96
snR49snR49 SMX3P54999 86 aaPredicted RBP2.8□□□□□ -1.96
snR49snR49 NRG1Q03125 231 aa2.8□□□□□ -1.96
snR49snR49 MRI1Q06489 411 aaKnown RBP2.8□□□□□ -1.96
snR49snR49 OPI10Q08202 246 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms