RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W BAP2P38084 609 aa2.24□□□□□ -2.05
CTF4YPR135W RDH54P38086 958 aa2.24□□□□□ -2.05
CTF4YPR135W VPS4P52917 437 aa2.24□□□□□ -2.05
CTF4YPR135W GTF1P53260 183 aaPredicted RBP2.24□□□□□ -2.05
CTF4YPR135W NOP7P53261 605 aaKnown RBP2.24□□□□□ -2.05
CTF4YPR135W VPS62P53285 467 aa2.24□□□□□ -2.05
CTF4YPR135W DAL4Q04895 635 aa2.24□□□□□ -2.05
CTF4YPR135W HEM13P11353 328 aaKnown RBP2.23□□□□□ -2.05
CTF4YPR135W STV1P37296 890 aa2.23□□□□□ -2.05
CTF4YPR135W YFL054CP43549 646 aa2.23□□□□□ -2.05
CTF4YPR135W ATG36P46983 293 aa2.23□□□□□ -2.05
CTF4YPR135W RAT1Q02792 1006 aaKnown RBP2.23□□□□□ -2.05
CTF4YPR135W EST2Q06163 884 aa2.23□□□□□ -2.05
CTF4YPR135W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
CTF4YPR135W SSM4P40318 1319 aa2.23□□□□□ -2.05
CTF4YPR135W CAF20P12962 161 aaKnown RBP2.23□□□□□ -2.05
CTF4YPR135W PSF2P40359 213 aa2.23□□□□□ -2.05
CTF4YPR135W YGL140CP53120 1219 aa2.23□□□□□ -2.05
CTF4YPR135W SNU71P53207 620 aaKnown RBP2.23□□□□□ -2.05
CTF4YPR135W UBP16Q02863 499 aa2.23□□□□□ -2.05
CTF4YPR135W RIB2Q12362 591 aaKnown RBP2.23□□□□□ -2.05
CTF4YPR135W YBL113CQ7M4S9 792 aa2.23□□□□□ -2.05
CTF4YPR135W TAO3P40468 2376 aa2.22□□□□□ -2.05
CTF4YPR135W RFC5P38251 354 aa2.22□□□□□ -2.05
CTF4YPR135W OCA5P38738 679 aa2.22□□□□□ -2.05
CTF4YPR135W YLR224WQ05947 369 aa2.22□□□□□ -2.05
CTF4YPR135W DIB1Q06819 143 aaPredicted RBP2.22□□□□□ -2.05
CTF4YPR135W KAR2P16474 682 aaKnown RBP2.22□□□□□ -2.05
CTF4YPR135W EMC1P25574 760 aa2.22□□□□□ -2.05
CTF4YPR135W ALG3P38179 458 aa2.22□□□□□ -2.05
CTF4YPR135W STM1P39015 273 aaKnown RBP2.22□□□□□ -2.05
CTF4YPR135W GCV2P49095 1034 aa2.22□□□□□ -2.05
CTF4YPR135W YBP2P53169 641 aa2.22□□□□□ -2.05
CTF4YPR135W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
CTF4YPR135W TOS4Q06266 489 aa2.22□□□□□ -2.05
CTF4YPR135W SEC20P28791 383 aa2.21□□□□□ -2.05
CTF4YPR135W ASF1P32447 279 aa2.21□□□□□ -2.05
CTF4YPR135W SPC42P36094 363 aa2.21□□□□□ -2.05
CTF4YPR135W FMP30Q02883 468 aa2.21□□□□□ -2.05
CTF4YPR135W DAP1Q12091 152 aa2.21□□□□□ -2.05
CTF4YPR135W ESL2P36168 1195 aa2.21□□□□□ -2.06
CTF4YPR135W MSS4P38994 779 aa2.21□□□□□ -2.06
CTF4YPR135W PBP1P53297 722 aaKnown RBP2.21□□□□□ -2.06
CTF4YPR135W CRF1Q04930 467 aa2.21□□□□□ -2.06
CTF4YPR135W HAT1Q12341 374 aa2.21□□□□□ -2.06
CTF4YPR135W FAB1P34756 2278 aa2.21□□□□□ -2.06
CTF4YPR135W UBR2Q07963 1872 aa2.21□□□□□ -2.06
CTF4YPR135W PMA1P05030 918 aaKnown RBP2.21□□□□□ -2.06
CTF4YPR135W CBP1P07252 654 aa2.21□□□□□ -2.06
CTF4YPR135W APL1P27351 700 aa2.21□□□□□ -2.06
CTF4YPR135W KTR4P38131 464 aa2.21□□□□□ -2.06
CTF4YPR135W BUD27P43573 796 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
CTF4YPR135W RRP15Q06511 250 aaPredicted RBP2.21□□□□□ -2.06
CTF4YPR135W YML133CQ03099 1374 aa2.2□□□□□ -2.06
CTF4YPR135W TUS1Q06412 1307 aa2.2□□□□□ -2.06
CTF4YPR135W HEM3P28789 327 aa2.2□□□□□ -2.06
CTF4YPR135W PPM2Q08282 695 aa2.2□□□□□ -2.06
CTF4YPR135W SVS1Q12254 260 aa2.2□□□□□ -2.06
CTF4YPR135W NUP145P49687 1317 aa2.2□□□□□ -2.06
CTF4YPR135W SEC23P15303 768 aaKnown RBP2.2□□□□□ -2.06
CTF4YPR135W HSP104P31539 908 aaKnown RBP2.2□□□□□ -2.06
CTF4YPR135W DEF1P35732 738 aaKnown RBP2.2□□□□□ -2.06
CTF4YPR135W RPN3P40016 523 aaKnown RBP2.2□□□□□ -2.06
CTF4YPR135W ZDS2P54786 942 aa2.2□□□□□ -2.06
CTF4YPR135W KIN2P13186 1147 aaKnown RBP2.19□□□□□ -2.06
CTF4YPR135W ATE1P16639 503 aa2.19□□□□□ -2.06
CTF4YPR135W DAK2P43550 591 aa2.19□□□□□ -2.06
CTF4YPR135W MDG1P53885 366 aa2.19□□□□□ -2.06
CTF4YPR135W ADI1Q03677 179 aa2.19□□□□□ -2.06
CTF4YPR135W YPL260WQ08977 551 aa2.19□□□□□ -2.06
CTF4YPR135W HMI1Q12039 706 aa2.19□□□□□ -2.06
CTF4YPR135W RRG1Q12167 365 aaPredicted RBP2.19□□□□□ -2.06
CTF4YPR135W HIP1P06775 603 aa2.19□□□□□ -2.06
CTF4YPR135W ERG7P38604 731 aa2.19□□□□□ -2.06
CTF4YPR135W YPL109CQ02981 657 aa2.19□□□□□ -2.06
CTF4YPR135W PHO4P07270 312 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W DCG1P32460 244 aa2.18□□□□□ -2.06
CTF4YPR135W VPS35P34110 944 aa2.18□□□□□ -2.06
CTF4YPR135W BRN1P38170 754 aa2.18□□□□□ -2.06
CTF4YPR135W YFR016CP43597 1233 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W VID30P53076 958 aa2.18□□□□□ -2.06
CTF4YPR135W DOS2P54858 310 aa2.18□□□□□ -2.06
CTF4YPR135W SYF1Q04048 859 aaPredicted RBP2.18□□□□□ -2.06
CTF4YPR135W RPL40AP0CH08 128 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W RPL40BP0CH09 128 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W GCD6P32501 712 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W FRD1P32614 470 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W UIP5P36137 443 aa2.18□□□□□ -2.06
CTF4YPR135W FAA3P39002 694 aa2.18□□□□□ -2.06
CTF4YPR135W PLB1P39105 664 aa2.18□□□□□ -2.06
CTF4YPR135W SIP5P40210 489 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W ZDS1P50111 915 aaKnown RBP2.18□□□□□ -2.06
CTF4YPR135W FLO11P08640 1367 aa2.18□□□□□ -2.06
CTF4YPR135W SSK22P25390 1331 aaPredicted RBP2.18□□□□□ -2.06
CTF4YPR135W ROD1Q02805 837 aa2.17□□□□□ -2.06
CTF4YPR135W VPS13Q07878 3144 aa2.17□□□□□ -2.06
CTF4YPR135W SER1P33330 395 aaKnown RBP2.17□□□□□ -2.06
CTF4YPR135W MOH1P38191 138 aa2.17□□□□□ -2.06
CTF4YPR135W PIC2P40035 300 aa2.17□□□□□ -2.06
CTF4YPR135W UBA2P52488 636 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms