RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	PRE9	P23638	258 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	RIT1	P23796	513 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	CAD1	P24813	409 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	PRO3	P32263	286 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	RDH54	P38086	958 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	NNF1	P47149	201 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	GNP1	P48813	663 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	VID30	P53076	958 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	NUT1	P53114	1132 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	PIB2	P53191	635 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	HEH2	Q03281	663 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	SKY1	Q03656	742 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	MSH6	Q03834	1242 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	YCS4	Q06156	1176 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	FAB1	P34756	2278 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	CHO2	P05374	869 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	RGP1	P16664	663 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	FUB1	P25659	250 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	SYN8	P31377	255 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	PEP7	P32609	515 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	MYO3	P36006	1272 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	RPT6	Q01939	405 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	EMI2	Q04409	500 aa	Known RBP	2.79	□□□□□ -1.96
VTC3	YPL019C	YLL058W	Q12198	575 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	YOL098C	Q12496	1037 aa		2.79	□□□□□ -1.96
VTC3	YPL019C	MRP10	O75012	95 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	ANP1	P32629	500 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	SMY2	P32909	740 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	YKL069W	P36088	180 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	RIM11	P38615	370 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	YHL008C	P38750	627 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	CIC1	P38779	376 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	NUP85	P46673	744 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	FAA4	P47912	694 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	RPS7B	P48164	190 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	FMS1	P50264	508 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	MET13	P53128	600 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	MON1	P53129	644 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	YGR035C	P53222	116 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	MRPS35	P53292	345 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	HST3	P53687	447 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	PTA1	Q01329	785 aa	Predicted RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	ECM16	Q04217	1267 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	GCR1	P07261	785 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	PWP2	P25635	923 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	AIM46	P38885	310 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	TVP23	P38962	199 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	FMP10	P40098	244 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	BUD6	P41697	788 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	UBP15	P50101	1230 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	YGR053C	P53234	283 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	YNL034W	P53963	612 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	YNL018C	P53976	612 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	SUE1	Q06524	206 aa		2.78	□□□□□ -1.96
VTC3	YPL019C	CMR1	Q12510	522 aa	Known RBP	2.78	□□□□□ -1.96
VTC3	YPL019C	FKS1	P38631	1876 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	CIT2	P08679	460 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	CDC34	P14682	295 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MSD1	P15179	658 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	RPL8A	P17076	256 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	URK1	P27515	501 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
VTC3	YPL019C	AHP1	P38013	176 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	APM2	P38700	605 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	HMF1	P40037	129 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	TPM2	P40414	161 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	INP51	P40559	946 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	ALG2	P43636	503 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	HUL5	P53119	910 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	ART5	P53244	586 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	EEB1	Q02891	456 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	ADI1	Q03677	179 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	SPO71	Q03868	1245 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MMR1	Q06324	491 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	AIM44	Q99299	758 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	SES1	P07284	462 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	CDC16	P09798	840 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MAK31	P23059	88 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	PET112	P33893	541 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MNR2	P35724	969 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	TFA2	P36145	328 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	AMN1	P38285	549 aa	Predicted RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	HXT13	P39924	564 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	INP52	P50942	1183 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MDR1	P53258	950 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	HXT17	P53631	564 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	HXT15	P54854	567 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MDM1	Q01846	1127 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	MYO5	Q04439	1219 aa	Known RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	SPN1	Q06505	410 aa	Predicted RBP	2.77	□□□□□ -1.97
VTC3	YPL019C	OXR1	Q08952	273 aa		2.77	□□□□□ -1.97
VTC3	YPL019C	KIN82	P25341	720 aa		2.76	□□□□□ -1.97
VTC3	YPL019C	MSS51	P32335	436 aa		2.76	□□□□□ -1.97
VTC3	YPL019C	RME1	P32338	300 aa	Known RBP	2.76	□□□□□ -1.97
VTC3	YPL019C	BUD2	P33314	1104 aa		2.76	□□□□□ -1.97
VTC3	YPL019C	SPC42	P36094	363 aa		2.76	□□□□□ -1.97
VTC3	YPL019C	MRPL16	P38064	232 aa		2.76	□□□□□ -1.97
VTC3	YPL019C	RFC1	P38630	861 aa	Known RBP	2.76	□□□□□ -1.97
VTC3	YPL019C	CRG1	P38892	291 aa	RIP-Chip data	2.76	□□□□□ -1.97	not detected
VTC3	YPL019C	MAD1	P40957	749 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 60.5 ms