RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	RSC3	Q06639	885 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	RRG1	Q12167	365 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	ENT1	Q12518	454 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	MET8	P15807	274 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	RAD16	P31244	790 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	YKU70	P32807	602 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	EMP65	P40085	556 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	CCT5	P40413	562 aa	Known RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	TAD1	P53065	400 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	PRP43	P53131	767 aa	Known RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	GEA1	P47102	1408 aa	Predicted RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	IME2	P32581	645 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	YBL086C	P38177	466 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	YBR238C	P38330	731 aa	Known RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	RBG2	P53295	368 aa	Known RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	CNM67	P53865	581 aa	Known RBP	6.06	□□□□□ -1.44
NUP1	YOR098C	SKY1	Q03656	742 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	SAS4	Q04003	481 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	TAF11	Q04226	346 aa		6.06	□□□□□ -1.44
NUP1	YOR098C	RPS21A	P0C0V8	87 aa	Known RBP	6.05	□□□□□ -1.44
NUP1	YOR098C	FUR1	P18562	216 aa	Known RBP	6.05	□□□□□ -1.44
NUP1	YOR098C	DID4	P36108	232 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	FUN12	P39730	1002 aa	Known RBP	6.05	□□□□□ -1.44
NUP1	YOR098C	DLD3	P39976	496 aa	Known RBP	6.05	□□□□□ -1.44
NUP1	YOR098C	TIM10	P87108	93 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	YLR287C	Q05881	355 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	YPR027C	Q12079	277 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	TRK1	P12685	1235 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	PAH1	P32567	862 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	MCD4	P36051	919 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	YNL035C	P53962	389 aa	Known RBP	6.05	□□□□□ -1.44
NUP1	YOR098C	SGD1	Q06132	899 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	SMC4	Q12267	1418 aa		6.05	□□□□□ -1.44
NUP1	YOR098C	SCT1	P32784	759 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	MDJ1	P35191	511 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	RRP9	Q06506	573 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	GUP2	Q08929	609 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	ENA1	P13587	1091 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	RGP1	P16664	663 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	RET1	P22276	1149 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	HOG1	P32485	435 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	ULI1	P43604	169 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	BFA1	P47113	574 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	ENA2	Q01896	1091 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	COG8	Q04632	607 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	PGC1	Q08959	321 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	PSH1	Q12161	406 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	TCB1	Q12466	1186 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	ENA5	Q12691	1091 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	PDR15	Q04182	1529 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	DAL7	P21826	554 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	AFR1	P33304	620 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	NOP16	P40007	231 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	TPA1	P40032	644 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	JJJ2	P46997	583 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	YGR283C	P53336	341 aa	Predicted RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	MRPL19	P53875	158 aa		6.04	□□□□□ -1.44
NUP1	YOR098C	DUS3	Q06053	668 aa	Known RBP	6.04	□□□□□ -1.44
NUP1	YOR098C	PGS1	P25578	521 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	SHU2	P38957	223 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	YNL058C	P53947	316 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	CUS1	Q02554	436 aa	Predicted RBP	6.03	□□□□□ -1.44
NUP1	YOR098C	YPL191C	Q08930	360 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	HSP42	Q12329	375 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	SRB8	P25648	1427 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	LRP1	P38801	184 aa	Known RBP	6.03	□□□□□ -1.44
NUP1	YOR098C	HXT6	P39003	570 aa	Known RBP	6.03	□□□□□ -1.44
NUP1	YOR098C	HXT7	P39004	570 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	RGA1	P39083	1007 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	YTA6	P40328	754 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	DPH1	P40487	425 aa	Known RBP	6.03	□□□□□ -1.44
NUP1	YOR098C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	6.03	□□□□□ -1.44	RIP-Chip
NUP1	YOR098C	FUN30	P31380	1131 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	SHM2	P37291	469 aa	Known RBP	6.03	□□□□□ -1.44
NUP1	YOR098C	SSN3	P39073	555 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	YEL068C	P39977	110 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	TOK1	P40310	691 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	VHR1	P40522	640 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	TEP1	P53916	434 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	LCD1	Q04377	747 aa		6.03	□□□□□ -1.44
NUP1	YOR098C	IRC20	Q06554	1556 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-LR4	P0C2I8	440 aa	Known RBP	6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-DR6	P0CX70	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-ER1	P0CX71	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-LR2	P0CX72	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-PL	P0CX73	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-JR1	P0CX74	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-LR3	P0CX75	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-ML2	P0CX76	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	MSH1	P25846	959 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	SEG2	P34250	1132 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	YRO2	P38079	344 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	IRC6	P43615	237 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	ARH1	P48360	493 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	BNI4	P53858	892 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-GR1	Q12085	440 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	6.02	□□□□□ -1.45
NUP1	YOR098C	TY1A-OL	Q92392	440 aa	Known RBP	6.02	□□□□□ -1.45
NUP1	YOR098C	CLC1	P17891	233 aa		6.02	□□□□□ -1.45
NUP1	YOR098C	CMK1	P27466	446 aa	Known RBP	6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms