RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C SEC6P32844 805 aa4.35□□□□□ -1.71
VHS3YOR054C YKL091CP33324 310 aaKnown RBP4.35□□□□□ -1.71
VHS3YOR054C SLA2P33338 968 aa4.35□□□□□ -1.71
VHS3YOR054C OCT1P35999 772 aa4.35□□□□□ -1.71
VHS3YOR054C SSF1P38789 453 aaPredicted RBP4.35□□□□□ -1.71
VHS3YOR054C YER156CP40093 338 aaKnown RBP4.35□□□□□ -1.71
VHS3YOR054C MET18P40469 1032 aa4.35□□□□□ -1.71
VHS3YOR054C SHQ1P40486 507 aaPredicted RBP4.35□□□□□ -1.71
VHS3YOR054C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
VHS3YOR054C MRPS35P53292 345 aa4.35□□□□□ -1.71
VHS3YOR054C YGR266WP53326 701 aa4.35□□□□□ -1.71
VHS3YOR054C FAR11P53917 953 aa4.35□□□□□ -1.71
VHS3YOR054C GFD1Q04839 188 aaKnown RBP4.35□□□□□ -1.71
VHS3YOR054C RGA2Q06407 1009 aa4.35□□□□□ -1.71
VHS3YOR054C ATG13Q06628 738 aa4.35□□□□□ -1.71
VHS3YOR054C YLR001CQ07895 862 aa4.35□□□□□ -1.71
VHS3YOR054C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
VHS3YOR054C AFT2Q08957 416 aa4.35□□□□□ -1.71
VHS3YOR054C VIK1Q12045 647 aa4.35□□□□□ -1.71
VHS3YOR054C YBL029C-AQ3E756 94 aa4.35□□□□□ -1.71
VHS3YOR054C RPS9BP05755 195 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RPS6AP0CX37 236 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RPS6BP0CX38 236 aaPredicted RBP4.34□□□□□ -1.71
VHS3YOR054C PYC1P11154 1178 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C SNA3P14359 133 aa4.34□□□□□ -1.71
VHS3YOR054C ESS1P22696 170 aa4.34□□□□□ -1.71
VHS3YOR054C ADY2P25613 283 aa4.34□□□□□ -1.71
VHS3YOR054C BUD23P25627 275 aaPredicted RBP4.34□□□□□ -1.71
VHS3YOR054C YCR051WP25631 222 aa4.34□□□□□ -1.71
VHS3YOR054C SEC20P28791 383 aa4.34□□□□□ -1.71
VHS3YOR054C RRN6P32786 894 aa4.34□□□□□ -1.71
VHS3YOR054C DCW1P36091 449 aa4.34□□□□□ -1.71
VHS3YOR054C AKL1P38080 1108 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C PEX18P38855 283 aa4.34□□□□□ -1.71
VHS3YOR054C JJJ2P46997 583 aa4.34□□□□□ -1.71
VHS3YOR054C EAF6P47128 113 aa4.34□□□□□ -1.71
VHS3YOR054C HOP2P53187 214 aa4.34□□□□□ -1.71
VHS3YOR054C MDR1P53258 950 aa4.34□□□□□ -1.71
VHS3YOR054C USA1Q03714 838 aa4.34□□□□□ -1.71
VHS3YOR054C POB3Q04636 552 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C FUS2Q05670 677 aa4.34□□□□□ -1.71
VHS3YOR054C ATG17Q06410 417 aa4.34□□□□□ -1.71
VHS3YOR054C CSR1Q06705 408 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C OPY2Q06810 360 aa4.34□□□□□ -1.71
VHS3YOR054C BRE1Q07457 700 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RRP6Q12149 733 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RPB2P08518 1224 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C SSC1P0CS90 654 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RPP1BP10622 106 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C RAD4P14736 754 aa4.34□□□□□ -1.71
VHS3YOR054C SPO12P17123 173 aa4.34□□□□□ -1.71
VHS3YOR054C CKI1P20485 582 aa4.34□□□□□ -1.71
VHS3YOR054C SEC15P22224 910 aa4.34□□□□□ -1.71
VHS3YOR054C RPC34P32910 317 aa4.34□□□□□ -1.71
VHS3YOR054C UTP11P34247 250 aaPredicted RBP4.34□□□□□ -1.71
VHS3YOR054C YET1P35723 206 aa4.34□□□□□ -1.71
VHS3YOR054C YBR242WP38331 238 aa4.34□□□□□ -1.71
VHS3YOR054C VMA22P38784 181 aa4.34□□□□□ -1.71
VHS3YOR054C YKE2P52553 114 aa4.34□□□□□ -1.71
VHS3YOR054C LSC1P53598 329 aaKnown RBP4.34□□□□□ -1.71
VHS3YOR054C NOP15P53927 220 aaPredicted RBP4.34□□□□□ -1.71
VHS3YOR054C RSM28Q03430 361 aa4.34□□□□□ -1.71
VHS3YOR054C VTI1Q04338 217 aa4.34□□□□□ -1.71
VHS3YOR054C YML083CQ04526 418 aa4.34□□□□□ -1.71
VHS3YOR054C REP1P03871 373 aa4.33□□□□□ -1.72
VHS3YOR054C PET494P07390 489 aaPredicted RBP4.33□□□□□ -1.72
VHS3YOR054C MATALPHA2P0CY08 210 aa4.33□□□□□ -1.72
VHS3YOR054C HMLALPHA2P0CY09 210 aa4.33□□□□□ -1.72
VHS3YOR054C PGI1P12709 554 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C STE6P12866 1290 aa4.33□□□□□ -1.72
VHS3YOR054C RGP1P16664 663 aa4.33□□□□□ -1.72
VHS3YOR054C ARG8P18544 423 aa4.33□□□□□ -1.72
VHS3YOR054C UBA1P22515 1024 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C PUP1P25043 261 aa4.33□□□□□ -1.72
VHS3YOR054C SEC21P32074 935 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C SAC6P32599 642 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C YKL222CP35995 705 aa4.33□□□□□ -1.72
VHS3YOR054C TOS1P38288 455 aa4.33□□□□□ -1.72
VHS3YOR054C TDA3P38758 523 aa4.33□□□□□ -1.72
VHS3YOR054C CIC1P38779 376 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C YHB1P39676 399 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C BOI2P39969 1040 aa4.33□□□□□ -1.72
VHS3YOR054C PDS1P40316 373 aaPredicted RBP4.33□□□□□ -1.72
VHS3YOR054C IRR1P40541 1150 aa4.33□□□□□ -1.72
VHS3YOR054C TDA10P42938 290 aa4.33□□□□□ -1.72
VHS3YOR054C YGL176CP46945 554 aa4.33□□□□□ -1.72
VHS3YOR054C FYV8P46949 817 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C RPM2Q02773 1202 aa4.33□□□□□ -1.72
VHS3YOR054C RAT1Q02792 1006 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C SYF1Q04048 859 aaPredicted RBP4.33□□□□□ -1.72
VHS3YOR054C UTP5Q04177 643 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C URH1Q04179 340 aa4.33□□□□□ -1.72
VHS3YOR054C YML082WQ04533 649 aaKnown RBP4.33□□□□□ -1.72
VHS3YOR054C YLR407WQ06070 228 aa4.33□□□□□ -1.72
VHS3YOR054C YPR109WQ06104 294 aa4.33□□□□□ -1.72
VHS3YOR054C CSC1Q06538 782 aa4.33□□□□□ -1.72
VHS3YOR054C SCM3Q12334 223 aa4.33□□□□□ -1.72
VHS3YOR054C POM152P39685 1337 aa4.33□□□□□ -1.72
VHS3YOR054C COQ4O13525 335 aa4.33□□□□□ -1.72
VHS3YOR054C RPL24AP04449 155 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms