RNA–Protein interactions for RNA: YOL048C

RRT8, Transcript of Protein involved in spore wall assembly, yeastyeast

Gene RRT8, Length 1,029 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRT8YOL048C TIM23P32897 222 aa9.52□□□□□ -0.89
RRT8YOL048C SMY2P32909 740 aaKnown RBP9.52□□□□□ -0.89
RRT8YOL048C ATG3P40344 310 aa9.52□□□□□ -0.89
RRT8YOL048C SMC3P47037 1230 aa9.52□□□□□ -0.89
RRT8YOL048C JSN1P47135 1091 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
RRT8YOL048C YJR107WP47145 328 aa9.52□□□□□ -0.89
RRT8YOL048C COS5P47187 383 aa9.52□□□□□ -0.89
RRT8YOL048C CEF1Q03654 590 aaPredicted RBP9.52□□□□□ -0.89
RRT8YOL048C UTP14Q04500 899 aaKnown RBP9.52□□□□□ -0.89
RRT8YOL048C VPS38Q05919 439 aa9.52□□□□□ -0.89
RRT8YOL048C IES4Q08561 116 aa9.52□□□□□ -0.89
RRT8YOL048C UBC1P21734 215 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C EFT1P32324 842 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C GUA1P38625 525 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C KSP1P38691 1029 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C SMC2P38989 1170 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C LCB2P40970 561 aa9.51□□□□□ -0.89
RRT8YOL048C VNX1P42839 908 aa9.51□□□□□ -0.89
RRT8YOL048C SKP2P42843 763 aa9.51□□□□□ -0.89
RRT8YOL048C IES1P43579 692 aa9.51□□□□□ -0.89
RRT8YOL048C STU2P46675 888 aa9.51□□□□□ -0.89
RRT8YOL048C CAF130P53280 1122 aaPredicted RBP9.51□□□□□ -0.89
RRT8YOL048C VTC3Q02725 835 aa9.51□□□□□ -0.89
RRT8YOL048C YPR078CQ06813 372 aa9.51□□□□□ -0.89
RRT8YOL048C RLP24Q07915 199 aaKnown RBP9.51□□□□□ -0.89
RRT8YOL048C ICL2Q12031 575 aa9.51□□□□□ -0.89
RRT8YOL048C MTF2P10849 440 aa9.5□□□□□ -0.89
RRT8YOL048C PET123P17558 318 aa9.5□□□□□ -0.89
RRT8YOL048C PDC6P26263 563 aaKnown RBP9.5□□□□□ -0.89
RRT8YOL048C KTR2P33550 425 aa9.5□□□□□ -0.89
RRT8YOL048C PIN4P34217 668 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
RRT8YOL048C PXL1P36166 706 aa9.5□□□□□ -0.89
RRT8YOL048C HSH155P49955 971 aaKnown RBP9.5□□□□□ -0.89
RRT8YOL048C NCS6P53088 359 aa9.5□□□□□ -0.89
RRT8YOL048C CUL3P53202 744 aa9.5□□□□□ -0.89
RRT8YOL048C YNL146WP53906 100 aa9.5□□□□□ -0.89
RRT8YOL048C UTP5Q04177 643 aaKnown RBP9.5□□□□□ -0.89
RRT8YOL048C YLR297WQ05899 129 aa9.5□□□□□ -0.89
RRT8YOL048C OPY2Q06810 360 aa9.5□□□□□ -0.89
RRT8YOL048C FAL1Q12099 399 aaKnown RBP9.5□□□□□ -0.89
RRT8YOL048C HIF1Q12373 385 aa9.5□□□□□ -0.89
RRT8YOL048C YOR131CQ12486 218 aa9.5□□□□□ -0.89
RRT8YOL048C KIN82P25341 720 aa9.49□□□□□ -0.89
RRT8YOL048C CBF2P32504 956 aa9.49□□□□□ -0.89
RRT8YOL048C JNM1P36224 373 aa9.49□□□□□ -0.89
RRT8YOL048C VID24P38263 362 aa9.49□□□□□ -0.89
RRT8YOL048C CAJ1P39101 391 aa9.49□□□□□ -0.89
RRT8YOL048C SHQ1P40486 507 aaPredicted RBP9.49□□□□□ -0.89
RRT8YOL048C SCD6P45978 349 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
RRT8YOL048C APT1P49435 187 aaKnown RBP9.49□□□□□ -0.89
RRT8YOL048C ERG5P54781 538 aa9.49□□□□□ -0.89
RRT8YOL048C DAK1P54838 584 aaKnown RBP9.49□□□□□ -0.89
RRT8YOL048C MSC2Q03455 724 aa9.49□□□□□ -0.89
RRT8YOL048C SLX4Q12098 748 aa9.49□□□□□ -0.89
RRT8YOL048C ATG11Q12527 1178 aa9.49□□□□□ -0.89
RRT8YOL048C PPR1P07272 904 aaPredicted RBP9.48□□□□□ -0.89
RRT8YOL048C VMA1P17255 1071 aaKnown RBP9.48□□□□□ -0.89
RRT8YOL048C BCS1P32839 456 aa9.48□□□□□ -0.89
RRT8YOL048C ORC5P50874 479 aa9.48□□□□□ -0.89
RRT8YOL048C DON1Q05610 365 aa9.48□□□□□ -0.89
RRT8YOL048C HFI1Q12060 488 aa9.48□□□□□ -0.89
RRT8YOL048C SUT2Q12286 268 aa9.48□□□□□ -0.89
RRT8YOL048C MAM3Q12296 706 aa9.48□□□□□ -0.89
RRT8YOL048C RTP1Q12751 981 aa9.48□□□□□ -0.89
RRT8YOL048C FKS1P38631 1876 aaKnown RBP9.47□□□□□ -0.89
RRT8YOL048C SNA3P14359 133 aa9.47□□□□□ -0.89
RRT8YOL048C RME1P32338 300 aaKnown RBP9.47□□□□□ -0.89
RRT8YOL048C KIC1P38692 1080 aa9.47□□□□□ -0.89
RRT8YOL048C RRD1P40454 393 aaKnown RBP9.47□□□□□ -0.89
RRT8YOL048C SAD1P43589 448 aa9.47□□□□□ -0.89
RRT8YOL048C ALF1P53904 254 aa9.47□□□□□ -0.89
RRT8YOL048C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
RRT8YOL048C TBF1Q02457 562 aa9.47□□□□□ -0.89
RRT8YOL048C SHS1Q07657 551 aa9.47□□□□□ -0.89
RRT8YOL048C WHI2P12611 486 aa9.46□□□□□ -0.9
RRT8YOL048C TUP1P16649 713 aa9.46□□□□□ -0.9
RRT8YOL048C AFT1P22149 690 aa9.46□□□□□ -0.9
RRT8YOL048C STO1P34160 861 aaKnown RBP9.46□□□□□ -0.9
RRT8YOL048C NPP2P39997 493 aa9.46□□□□□ -0.9
RRT8YOL048C SEC9P40357 651 aa9.46□□□□□ -0.9
RRT8YOL048C MMM1P41800 426 aa9.46□□□□□ -0.9
RRT8YOL048C JJJ3P47138 172 aa9.46□□□□□ -0.9
RRT8YOL048C ASN1P49089 572 aaKnown RBP9.46□□□□□ -0.9
RRT8YOL048C SHE10P53075 577 aa9.46□□□□□ -0.9
RRT8YOL048C VPS72Q03388 795 aa9.46□□□□□ -0.9
RRT8YOL048C TRS130Q03660 1102 aa9.46□□□□□ -0.9
RRT8YOL048C YML082WQ04533 649 aaKnown RBP9.46□□□□□ -0.9
RRT8YOL048C RGA2Q06407 1009 aa9.46□□□□□ -0.9
RRT8YOL048C CSR1Q06705 408 aaKnown RBP9.46□□□□□ -0.9
RRT8YOL048C CDC53Q12018 815 aaKnown RBP9.46□□□□□ -0.9
RRT8YOL048C TOM70P07213 617 aaKnown RBP9.45□□□□□ -0.9
RRT8YOL048C DPH2P32461 534 aa9.45□□□□□ -0.9
RRT8YOL048C YMR124WP39523 943 aaKnown RBP9.45□□□□□ -0.9
RRT8YOL048C FIG4P42837 879 aa9.45□□□□□ -0.9
RRT8YOL048C ENV11P53246 860 aa9.45□□□□□ -0.9
RRT8YOL048C ULP1Q02724 621 aa9.45□□□□□ -0.9
RRT8YOL048C NEW1Q08972 1196 aaKnown RBP9.45□□□□□ -0.9
RRT8YOL048C WSC3Q12215 556 aa9.45□□□□□ -0.9
RRT8YOL048C MSS51P32335 436 aa9.44□□□□□ -0.9
RRT8YOL048C PAH1P32567 862 aa9.44□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms