RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W PPS1P38148 807 aa11.75□□□□□ -0.53
PRE6YOL038W STB4P50104 949 aa11.75□□□□□ -0.53
PRE6YOL038W EEB1Q02891 456 aa11.75□□□□□ -0.53
PRE6YOL038W PIG1Q06216 648 aa11.75□□□□□ -0.53
PRE6YOL038W YJL045WP47052 634 aa11.74□□□□□ -0.53
PRE6YOL038W PSR2Q07949 397 aa11.74□□□□□ -0.53
PRE6YOL038W FMP27Q06179 2628 aa11.73□□□□□ -0.53
PRE6YOL038W DAL7P21826 554 aa11.73□□□□□ -0.53
PRE6YOL038W SSD1P24276 1250 aaKnown RBP RIP-Chip data11.73□□□□□ -0.53not detected
PRE6YOL038W RPC53P25441 422 aa11.73□□□□□ -0.53
PRE6YOL038W PPZ1P26570 692 aa11.73□□□□□ -0.53
PRE6YOL038W PRR1P28708 518 aa11.73□□□□□ -0.53
PRE6YOL038W FAR11P53917 953 aa11.73□□□□□ -0.53
PRE6YOL038W SHS1Q07657 551 aa11.73□□□□□ -0.53
PRE6YOL038W CDC53Q12018 815 aaKnown RBP11.73□□□□□ -0.53
PRE6YOL038W ALG11P53954 548 aaKnown RBP11.72□□□□□ -0.53
PRE6YOL038W MRI1Q06489 411 aaKnown RBP11.72□□□□□ -0.53
PRE6YOL038W MRN1Q08925 612 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
PRE6YOL038W SKG6P32900 734 aaPredicted RBP11.71□□□□□ -0.53
PRE6YOL038W YEL023CP39992 682 aa11.71□□□□□ -0.53
PRE6YOL038W ISM1P48526 1002 aa11.71□□□□□ -0.53
PRE6YOL038W NBP1P52919 319 aaPredicted RBP11.71□□□□□ -0.53
PRE6YOL038W CUE3P53137 624 aaKnown RBP11.71□□□□□ -0.53
PRE6YOL038W RCR2Q03446 210 aaKnown RBP11.71□□□□□ -0.53
PRE6YOL038W SNU56Q03782 492 aaKnown RBP11.71□□□□□ -0.53
PRE6YOL038W CUR1Q06469 252 aa11.71□□□□□ -0.53
PRE6YOL038W ESC8Q08119 714 aa11.71□□□□□ -0.53
PRE6YOL038W DNL4Q08387 944 aaPredicted RBP11.71□□□□□ -0.53
PRE6YOL038W YPL277CQ08989 487 aa11.71□□□□□ -0.53
PRE6YOL038W RAD59Q12223 238 aa11.71□□□□□ -0.53
PRE6YOL038W OSH2Q12451 1283 aa11.71□□□□□ -0.53
PRE6YOL038W BEM2P39960 2167 aaKnown RBP11.7□□□□□ -0.54
PRE6YOL038W SNF1P06782 633 aaKnown RBP11.7□□□□□ -0.54
PRE6YOL038W SAF1P38352 637 aa11.7□□□□□ -0.54
PRE6YOL038W BIM1P40013 344 aa11.7□□□□□ -0.54
PRE6YOL038W ASN1P49089 572 aaKnown RBP11.7□□□□□ -0.54
PRE6YOL038W YLR257WQ06146 321 aaKnown RBP11.7□□□□□ -0.54
PRE6YOL038W PUS1Q12211 544 aaKnown RBP11.7□□□□□ -0.54
PRE6YOL038W PCK1P10963 549 aa11.69□□□□□ -0.54
PRE6YOL038W TRK2P28584 889 aa11.69□□□□□ -0.54
PRE6YOL038W RAD54P32863 898 aa11.69□□□□□ -0.54
PRE6YOL038W UBP13P38187 747 aa11.69□□□□□ -0.54
PRE6YOL038W DSF2P38213 736 aa11.69□□□□□ -0.54
PRE6YOL038W PCM1P38628 557 aaKnown RBP11.69□□□□□ -0.54
PRE6YOL038W PLP2Q12017 286 aa11.69□□□□□ -0.54
PRE6YOL038W SPO11P23179 398 aa11.68□□□□□ -0.54
PRE6YOL038W COQ8P27697 501 aa11.68□□□□□ -0.54
PRE6YOL038W MMS4P38257 691 aa11.68□□□□□ -0.54
PRE6YOL038W YTA12P40341 825 aa11.68□□□□□ -0.54
PRE6YOL038W VTC2P43585 828 aa11.68□□□□□ -0.54
PRE6YOL038W HRQ1Q05549 1077 aa11.68□□□□□ -0.54
PRE6YOL038W YPL216WQ08964 1102 aa11.68□□□□□ -0.54
PRE6YOL038W TAF13P11747 167 aa11.67□□□□□ -0.54
PRE6YOL038W APE1P14904 514 aa11.67□□□□□ -0.54
PRE6YOL038W CDC15P27636 974 aa11.67□□□□□ -0.54
PRE6YOL038W BMH1P29311 267 aaKnown RBP11.67□□□□□ -0.54
PRE6YOL038W CYS3P31373 394 aaKnown RBP11.67□□□□□ -0.54
PRE6YOL038W HIR1P32479 840 aa11.67□□□□□ -0.54
PRE6YOL038W VPS35P34110 944 aa11.67□□□□□ -0.54
PRE6YOL038W YKL097CP34245 136 aa11.67□□□□□ -0.54
PRE6YOL038W HMT1P38074 348 aa11.67□□□□□ -0.54
PRE6YOL038W PTC4P38089 393 aa11.67□□□□□ -0.54
PRE6YOL038W MMF1P40185 145 aaKnown RBP11.67□□□□□ -0.54
PRE6YOL038W YIR014WP40570 242 aa11.67□□□□□ -0.54
PRE6YOL038W HUL4P40985 892 aa11.67□□□□□ -0.54
PRE6YOL038W NUT1P53114 1132 aa11.67□□□□□ -0.54
PRE6YOL038W SPC98P53540 846 aa11.67□□□□□ -0.54
PRE6YOL038W FAP1P53971 965 aa11.67□□□□□ -0.54
PRE6YOL038W CDD1Q06549 142 aa11.67□□□□□ -0.54
PRE6YOL038W REC8Q12188 680 aa11.67□□□□□ -0.54
PRE6YOL038W HAP2P06774 265 aa11.66□□□□□ -0.54
PRE6YOL038W SPE1P08432 466 aa11.66□□□□□ -0.54
PRE6YOL038W YBR284WP38150 797 aa11.66□□□□□ -0.54
PRE6YOL038W PEX28P38848 579 aa11.66□□□□□ -0.54
PRE6YOL038W LCB2P40970 561 aa11.66□□□□□ -0.54
PRE6YOL038W PEX14P53112 341 aa11.66□□□□□ -0.54
PRE6YOL038W SEC5P89102 971 aa11.66□□□□□ -0.54
PRE6YOL038W CWC21Q03375 135 aaKnown RBP11.66□□□□□ -0.54
PRE6YOL038W TOR1P35169 2470 aa11.66□□□□□ -0.54
PRE6YOL038W BIK1P11709 440 aa11.65□□□□□ -0.54
PRE6YOL038W RAD27P26793 382 aa11.65□□□□□ -0.54
PRE6YOL038W TRM2P33753 639 aa11.65□□□□□ -0.54
PRE6YOL038W MOB1P40484 314 aa11.65□□□□□ -0.54
PRE6YOL038W SCD6P45978 349 aaKnown RBP RIP-Chip data11.65□□□□□ -0.54 RIP-Chip
PRE6YOL038W STP1Q00947 519 aa11.65□□□□□ -0.54
PRE6YOL038W UTP14Q04500 899 aaKnown RBP11.65□□□□□ -0.54
PRE6YOL038W TCO89Q08921 799 aa11.65□□□□□ -0.54
PRE6YOL038W RRD2Q12461 358 aa11.65□□□□□ -0.54
PRE6YOL038W CTF3Q12748 733 aa11.65□□□□□ -0.54
PRE6YOL038W PHO8P11491 566 aa11.64□□□□□ -0.55
PRE6YOL038W MNR2P35724 969 aa11.64□□□□□ -0.55
PRE6YOL038W RFT1P38206 574 aaPredicted RBP11.64□□□□□ -0.55
PRE6YOL038W YFL034WP43564 1073 aa11.64□□□□□ -0.55
PRE6YOL038W HSH155P49955 971 aaKnown RBP11.64□□□□□ -0.55
PRE6YOL038W SHE10P53075 577 aa11.64□□□□□ -0.55
PRE6YOL038W YGR130CP53278 816 aa11.64□□□□□ -0.55
PRE6YOL038W PML39Q03760 334 aa11.64□□□□□ -0.55
PRE6YOL038W YML083CQ04526 418 aa11.64□□□□□ -0.55
PRE6YOL038W MNL2Q12205 849 aa11.64□□□□□ -0.55
PRE6YOL038W BET2P20133 325 aa11.63□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms