RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YBR238CP38330 731 aaKnown RBP3.48□□□□□ -1.85
RPB11YOL005C NMD2P38798 1089 aaKnown RBP3.48□□□□□ -1.85
RPB11YOL005C NIT1P40447 199 aa3.48□□□□□ -1.85
RPB11YOL005C SHR5P41912 237 aa3.48□□□□□ -1.85
RPB11YOL005C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
RPB11YOL005C TAD1P53065 400 aa3.48□□□□□ -1.85
RPB11YOL005C ACK1Q07622 623 aaPredicted RBP3.48□□□□□ -1.85
RPB11YOL005C SOD2P00447 233 aa3.47□□□□□ -1.85
RPB11YOL005C PRC1P00729 532 aa3.47□□□□□ -1.85
RPB11YOL005C GSY1P23337 708 aa3.47□□□□□ -1.85
RPB11YOL005C SPC29P33419 253 aa3.47□□□□□ -1.85
RPB11YOL005C TSA1P34760 196 aaKnown RBP3.47□□□□□ -1.85
RPB11YOL005C EMC3P36039 253 aa3.47□□□□□ -1.85
RPB11YOL005C RRP14P36080 434 aaKnown RBP3.47□□□□□ -1.85
RPB11YOL005C YKE2P52553 114 aa3.47□□□□□ -1.85
RPB11YOL005C RIM8P53179 542 aa3.47□□□□□ -1.85
RPB11YOL005C YGR283CP53336 341 aaPredicted RBP3.47□□□□□ -1.85
RPB11YOL005C NOG2P53742 486 aaKnown RBP3.47□□□□□ -1.85
RPB11YOL005C YKR011CQ02209 353 aa3.47□□□□□ -1.85
RPB11YOL005C LRS4Q04087 347 aaKnown RBP3.47□□□□□ -1.85
RPB11YOL005C MET7Q08645 548 aa3.47□□□□□ -1.85
RPB11YOL005C HMI1Q12039 706 aa3.47□□□□□ -1.85
RPB11YOL005C RPP2AP05319 106 aaKnown RBP3.46□□□□□ -1.86
RPB11YOL005C YCL002CP25565 263 aa3.46□□□□□ -1.86
RPB11YOL005C VBA3P25594 458 aa3.46□□□□□ -1.86
RPB11YOL005C CYS3P31373 394 aaKnown RBP3.46□□□□□ -1.86
RPB11YOL005C ELM1P32801 640 aa3.46□□□□□ -1.86
RPB11YOL005C MNN1P39106 762 aa3.46□□□□□ -1.86
RPB11YOL005C MET12P46151 657 aa3.46□□□□□ -1.86
RPB11YOL005C YDR132CQ03900 495 aa3.46□□□□□ -1.86
RPB11YOL005C CRR1Q05790 422 aa3.46□□□□□ -1.86
RPB11YOL005C DUS4Q06063 367 aa3.46□□□□□ -1.86
RPB11YOL005C YOR022CQ12204 715 aa3.46□□□□□ -1.86
RPB11YOL005C HIS5P07172 385 aa3.45□□□□□ -1.86
RPB11YOL005C PRP6P19735 899 aaPredicted RBP3.45□□□□□ -1.86
RPB11YOL005C CAD1P24813 409 aaKnown RBP3.45□□□□□ -1.86
RPB11YOL005C SED4P25365 1065 aa3.45□□□□□ -1.86
RPB11YOL005C MSH2P25847 964 aa3.45□□□□□ -1.86
RPB11YOL005C SFP1P32432 683 aa3.45□□□□□ -1.86
RPB11YOL005C PEX6P33760 1030 aa3.45□□□□□ -1.86
RPB11YOL005C ATG19P35193 415 aa3.45□□□□□ -1.86
RPB11YOL005C IRC24P40580 263 aa3.45□□□□□ -1.86
RPB11YOL005C ALY2P47029 1046 aa3.45□□□□□ -1.86
RPB11YOL005C TMA10Q06177 86 aa3.45□□□□□ -1.86
RPB11YOL005C RSC3Q06639 885 aa3.45□□□□□ -1.86
RPB11YOL005C REH1Q06709 432 aa3.45□□□□□ -1.86
RPB11YOL005C ADY3Q07732 790 aa3.45□□□□□ -1.86
RPB11YOL005C NTG2Q08214 380 aa3.45□□□□□ -1.86
RPB11YOL005C RAD18P10862 487 aa3.44□□□□□ -1.86
RPB11YOL005C MEF1P25039 761 aa3.44□□□□□ -1.86
RPB11YOL005C CDC20P26309 610 aa3.44□□□□□ -1.86
RPB11YOL005C BRN1P38170 754 aa3.44□□□□□ -1.86
RPB11YOL005C PLB1P39105 664 aa3.44□□□□□ -1.86
RPB11YOL005C UBP5P39944 805 aa3.44□□□□□ -1.86
RPB11YOL005C MAL11P53048 616 aa3.44□□□□□ -1.86
RPB11YOL005C VPS62P53285 467 aa3.44□□□□□ -1.86
RPB11YOL005C HDA1P53973 706 aa3.44□□□□□ -1.86
RPB11YOL005C YLR224WQ05947 369 aa3.44□□□□□ -1.86
RPB11YOL005C NOP12Q08208 459 aaKnown RBP3.44□□□□□ -1.86
RPB11YOL005C HAL9Q12180 1030 aa3.44□□□□□ -1.86
RPB11YOL005C NPC2Q12408 173 aa3.44□□□□□ -1.86
RPB11YOL005C YLR358CO13565 187 aa3.43□□□□□ -1.86
RPB11YOL005C DIF1O13577 133 aa3.43□□□□□ -1.86
RPB11YOL005C CDC9P04819 755 aa3.43□□□□□ -1.86
RPB11YOL005C CDC6P09119 513 aa3.43□□□□□ -1.86
RPB11YOL005C TFB2Q02939 513 aa3.43□□□□□ -1.86
RPB11YOL005C ATP25Q03153 612 aa3.43□□□□□ -1.86
RPB11YOL005C UGO1Q03327 502 aa3.43□□□□□ -1.86
RPB11YOL005C MDM12Q92328 271 aa3.43□□□□□ -1.86
RPB11YOL005C STO1P34160 861 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C RPN10P38886 268 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C SET5P38890 526 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C MPT5P39016 859 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
RPB11YOL005C RLP7P40693 322 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C ZDS1P50111 915 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C MCM6P53091 1017 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C DUS1P53759 423 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C UPC2Q12151 913 aa3.42□□□□□ -1.86
RPB11YOL005C YGR161W-CQ3E744 92 aa3.42□□□□□ -1.86
RPB11YOL005C NOP14Q99207 810 aaKnown RBP3.42□□□□□ -1.86
RPB11YOL005C SRD1P09007 221 aa3.41□□□□□ -1.86
RPB11YOL005C PRE10P21242 288 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
RPB11YOL005C LST4P34239 828 aa3.41□□□□□ -1.86
RPB11YOL005C THI80P35202 319 aa3.41□□□□□ -1.86
RPB11YOL005C YHR078WP38799 552 aa3.41□□□□□ -1.86
RPB11YOL005C SAK1P38990 1142 aa3.41□□□□□ -1.86
RPB11YOL005C DOT6P40059 670 aaKnown RBP3.41□□□□□ -1.86
RPB11YOL005C SDP1P40479 209 aa3.41□□□□□ -1.86
RPB11YOL005C SWM1Q12379 170 aa3.41□□□□□ -1.86
RPB11YOL005C KCS1Q12494 1050 aa3.41□□□□□ -1.86
RPB11YOL005C ADR1P07248 1323 aa3.41□□□□□ -1.86
RPB11YOL005C MTC2P34246 357 aa3.4□□□□□ -1.87
RPB11YOL005C SPC42P36094 363 aa3.4□□□□□ -1.87
RPB11YOL005C FPR3P38911 411 aaKnown RBP3.4□□□□□ -1.87
RPB11YOL005C URM1P40554 99 aaPredicted RBP3.4□□□□□ -1.87
RPB11YOL005C YFL052WP43551 465 aa3.4□□□□□ -1.87
RPB11YOL005C CHA4P43634 648 aa3.4□□□□□ -1.87
RPB11YOL005C SSY5P47002 699 aa3.4□□□□□ -1.87
RPB11YOL005C TY4A-JP47023 414 aa3.4□□□□□ -1.87
RPB11YOL005C MTR3P48240 250 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 117.4 ms