RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W ATP25Q03153 612 aa4.47□□□□□ -1.69
SRP1YNL189W RSC3Q06639 885 aa4.47□□□□□ -1.69
SRP1YNL189W ADR1P07248 1323 aa4.47□□□□□ -1.69
SRP1YNL189W CDC6P09119 513 aa4.46□□□□□ -1.69
SRP1YNL189W RPC82P32349 654 aa4.46□□□□□ -1.69
SRP1YNL189W TSA1P34760 196 aaKnown RBP4.46□□□□□ -1.69
SRP1YNL189W HXT16P47185 567 aa4.46□□□□□ -1.69
SRP1YNL189W NIT3P49954 291 aa4.46□□□□□ -1.69
SRP1YNL189W ENV11P53246 860 aa4.46□□□□□ -1.69
SRP1YNL189W DUS4Q06063 367 aa4.46□□□□□ -1.69
SRP1YNL189W SPE1P08432 466 aa4.46□□□□□ -1.7
SRP1YNL189W RAD18P10862 487 aa4.46□□□□□ -1.7
SRP1YNL189W FPR3P38911 411 aaKnown RBP4.46□□□□□ -1.7
SRP1YNL189W YIL108WP40483 696 aaKnown RBP4.46□□□□□ -1.7
SRP1YNL189W YKR011CQ02209 353 aa4.46□□□□□ -1.7
SRP1YNL189W YDR132CQ03900 495 aa4.46□□□□□ -1.7
SRP1YNL189W YDR514CQ04408 483 aa4.46□□□□□ -1.7
SRP1YNL189W CDA2Q06703 312 aa4.46□□□□□ -1.7
SRP1YNL189W ADY3Q07732 790 aa4.46□□□□□ -1.7
SRP1YNL189W YLR001CQ07895 862 aa4.46□□□□□ -1.7
SRP1YNL189W SRD1P09007 221 aa4.45□□□□□ -1.7
SRP1YNL189W GAS1P22146 559 aaKnown RBP4.45□□□□□ -1.7
SRP1YNL189W EMC1P25574 760 aa4.45□□□□□ -1.7
SRP1YNL189W CYS3P31373 394 aaKnown RBP4.45□□□□□ -1.7
SRP1YNL189W MCD4P36051 919 aa4.45□□□□□ -1.7
SRP1YNL189W AIM3P38266 947 aaKnown RBP4.45□□□□□ -1.7
SRP1YNL189W ECL1P48235 211 aa4.45□□□□□ -1.7
SRP1YNL189W ZDS1P50111 915 aaKnown RBP4.45□□□□□ -1.7
SRP1YNL189W YNL193WP53870 558 aa4.45□□□□□ -1.7
SRP1YNL189W GCN5Q03330 439 aa4.45□□□□□ -1.7
SRP1YNL189W YGR161W-CQ3E744 92 aa4.45□□□□□ -1.7
SRP1YNL189W GSY1P23337 708 aa4.44□□□□□ -1.7
SRP1YNL189W RNQ1P25367 405 aa4.44□□□□□ -1.7
SRP1YNL189W TYE7P33122 291 aaPredicted RBP4.44□□□□□ -1.7
SRP1YNL189W POA1P38218 177 aa4.44□□□□□ -1.7
SRP1YNL189W NOG2P53742 486 aaKnown RBP4.44□□□□□ -1.7
SRP1YNL189W YOR352WQ08816 343 aa4.44□□□□□ -1.7
SRP1YNL189W GPB1Q08886 897 aa4.44□□□□□ -1.7
SRP1YNL189W YPL277CQ08989 487 aa4.44□□□□□ -1.7
SRP1YNL189W HMI1Q12039 706 aa4.44□□□□□ -1.7
SRP1YNL189W HAL9Q12180 1030 aa4.44□□□□□ -1.7
SRP1YNL189W YOR022CQ12204 715 aa4.44□□□□□ -1.7
SRP1YNL189W RPS9AO13516 197 aaKnown RBP4.43□□□□□ -1.7
SRP1YNL189W YAP6Q03935 383 aa4.43□□□□□ -1.7
SRP1YNL189W FBP1P09201 348 aa4.43□□□□□ -1.7
SRP1YNL189W MIH1P23748 554 aa4.43□□□□□ -1.7
SRP1YNL189W PCL2P25693 308 aa4.43□□□□□ -1.7
SRP1YNL189W CAF16P43569 289 aa4.43□□□□□ -1.7
SRP1YNL189W MET12P46151 657 aa4.43□□□□□ -1.7
SRP1YNL189W SPT20P50875 604 aa4.43□□□□□ -1.7
SRP1YNL189W VPS62P53285 467 aa4.43□□□□□ -1.7
SRP1YNL189W YDR338CQ05497 695 aa4.43□□□□□ -1.7
SRP1YNL189W YBR182C-AQ8TGU6 64 aa4.43□□□□□ -1.7
SRP1YNL189W RPS13P05756 151 aaKnown RBP4.42□□□□□ -1.7
SRP1YNL189W CDC20P26309 610 aa4.42□□□□□ -1.7
SRP1YNL189W SFP1P32432 683 aa4.42□□□□□ -1.7
SRP1YNL189W SCT1P32784 759 aa4.42□□□□□ -1.7
SRP1YNL189W STO1P34160 861 aaKnown RBP4.42□□□□□ -1.7
SRP1YNL189W ALY2P47029 1046 aa4.42□□□□□ -1.7
SRP1YNL189W AIM14P53109 570 aa4.42□□□□□ -1.7
SRP1YNL189W MET13P53128 600 aa4.42□□□□□ -1.7
SRP1YNL189W YNR029CP53729 429 aaKnown RBP4.42□□□□□ -1.7
SRP1YNL189W VPS30Q02948 557 aa4.42□□□□□ -1.7
SRP1YNL189W UTP14Q04500 899 aaKnown RBP4.42□□□□□ -1.7
SRP1YNL189W REH1Q06709 432 aa4.42□□□□□ -1.7
SRP1YNL189W UPC2Q12151 913 aa4.42□□□□□ -1.7
SRP1YNL189W HIS5P07172 385 aa4.41□□□□□ -1.7
SRP1YNL189W STE14P32584 239 aa4.41□□□□□ -1.7
SRP1YNL189W SAP190P36123 1033 aa4.41□□□□□ -1.7
SRP1YNL189W CRP1P38845 465 aaKnown RBP4.41□□□□□ -1.7
SRP1YNL189W RLP7P40693 322 aaKnown RBP4.41□□□□□ -1.7
SRP1YNL189W AVT1P47082 602 aa4.41□□□□□ -1.7
SRP1YNL189W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SRP1YNL189W PSP2P50109 593 aaKnown RBP4.41□□□□□ -1.7
SRP1YNL189W PBP1P53297 722 aaKnown RBP4.41□□□□□ -1.7
SRP1YNL189W ACK1Q07622 623 aaPredicted RBP4.41□□□□□ -1.7
SRP1YNL189W PRC1P00729 532 aa4.4□□□□□ -1.7
SRP1YNL189W SFL1P20134 766 aa4.4□□□□□ -1.7
SRP1YNL189W CHA4P43634 648 aa4.4□□□□□ -1.7
SRP1YNL189W PUS2P53167 370 aa4.4□□□□□ -1.7
SRP1YNL189W DUS1P53759 423 aaKnown RBP4.4□□□□□ -1.7
SRP1YNL189W SNP1Q00916 300 aaPredicted RBP4.4□□□□□ -1.7
SRP1YNL189W CRR1Q05790 422 aa4.4□□□□□ -1.7
SRP1YNL189W RXT3Q07458 294 aa4.4□□□□□ -1.7
SRP1YNL189W DIF1O13577 133 aa4.39□□□□□ -1.71
SRP1YNL189W HMG1P12683 1054 aa4.39□□□□□ -1.71
SRP1YNL189W TOD6P34219 525 aa4.39□□□□□ -1.71
SRP1YNL189W PLB1P39105 664 aa4.39□□□□□ -1.71
SRP1YNL189W SDP1P40479 209 aa4.39□□□□□ -1.71
SRP1YNL189W URM1P40554 99 aaPredicted RBP4.39□□□□□ -1.71
SRP1YNL189W HLJ1P48353 224 aa4.39□□□□□ -1.71
SRP1YNL189W UBC9P50623 157 aaPredicted RBP4.39□□□□□ -1.71
SRP1YNL189W ASM4Q05166 528 aa4.39□□□□□ -1.71
SRP1YNL189W Q0142Q9ZZW4 58 aa4.39□□□□□ -1.71
SRP1YNL189W SOD2P00447 233 aa4.39□□□□□ -1.71
SRP1YNL189W SSD1P24276 1250 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SRP1YNL189W TSR4P25040 408 aa4.39□□□□□ -1.71
SRP1YNL189W HOG1P32485 435 aa4.39□□□□□ -1.71
SRP1YNL189W THI80P35202 319 aa4.39□□□□□ -1.71
SRP1YNL189W PCM1P38628 557 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms