RNA–Protein interactions for RNA: YNL167C

SKO1, Transcript of Basic leucine zipper transcription factor of the ATF/CREB family, yeast

Gene SKO1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKO1	YNL167C	CDC53	Q12018	815 aa	Known RBP	4.17	□□□□□ -1.74
SKO1	YNL167C	UPC2	Q12151	913 aa		4.17	□□□□□ -1.74
SKO1	YNL167C	NTO1	Q12311	748 aa		4.17	□□□□□ -1.74
SKO1	YNL167C	TUB2	P02557	457 aa	Known RBP	4.16	□□□□□ -1.74
SKO1	YNL167C	MPH2	P0CD99	609 aa		4.16	□□□□□ -1.74
SKO1	YNL167C	TOP3	P13099	656 aa		4.16	□□□□□ -1.74
SKO1	YNL167C	TYE7	P33122	291 aa	Predicted RBP	4.16	□□□□□ -1.74
SKO1	YNL167C	TRM2	P33753	639 aa		4.16	□□□□□ -1.74
SKO1	YNL167C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SKO1	YNL167C	GUP2	Q08929	609 aa		4.16	□□□□□ -1.74
SKO1	YNL167C	FBP1	P09201	348 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	GAL11	P19659	1081 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	SED4	P25365	1065 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	URA1	P28272	314 aa	Predicted RBP	4.15	□□□□□ -1.74
SKO1	YNL167C	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.74
SKO1	YNL167C	NIT3	P49954	291 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	YKR011C	Q02209	353 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	ENB1	Q08299	606 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	ENV7	Q12003	364 aa		4.15	□□□□□ -1.74
SKO1	YNL167C	CAN1	P04817	590 aa		4.15	□□□□□ -1.75
SKO1	YNL167C	RSP5	P39940	809 aa	Known RBP	4.15	□□□□□ -1.75
SKO1	YNL167C	TOM70	P07213	617 aa	Known RBP	4.14	□□□□□ -1.75
SKO1	YNL167C	STE14	P32584	239 aa		4.14	□□□□□ -1.75
SKO1	YNL167C	SSL1	Q04673	461 aa	Predicted RBP	4.14	□□□□□ -1.75
SKO1	YNL167C	YOR131C	Q12486	218 aa		4.14	□□□□□ -1.75
SKO1	YNL167C	PFK1	P16861	987 aa	Known RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	SRP40	P32583	406 aa	Predicted RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	EMC3	P36039	253 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	BET3	P36149	193 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	YIL108W	P40483	696 aa	Known RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	CEP3	P40969	608 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	PHO23	P50947	330 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	RPS9A	O13516	197 aa	Known RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	KAR4	P25583	335 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	RPD3	P32561	433 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	DEF1	P35732	738 aa	Known RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	SDP1	P40479	209 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	NOG2	P53742	486 aa	Known RBP	4.13	□□□□□ -1.75
SKO1	YNL167C	HDA1	P53973	706 aa		4.13	□□□□□ -1.75
SKO1	YNL167C	YKL091C	P33324	310 aa	Known RBP	4.12	□□□□□ -1.75
SKO1	YNL167C	CTF8	P38877	133 aa		4.12	□□□□□ -1.75
SKO1	YNL167C	CHZ1	P40019	153 aa	Predicted RBP	4.12	□□□□□ -1.75
SKO1	YNL167C	ALG2	P43636	503 aa		4.12	□□□□□ -1.75
SKO1	YNL167C	RTA1	P53047	317 aa		4.12	□□□□□ -1.75
SKO1	YNL167C	DAM1	P53267	343 aa		4.12	□□□□□ -1.75
SKO1	YNL167C	YTA7	P40340	1379 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	MSE1	P48525	536 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	YGR283C	P53336	341 aa	Predicted RBP	4.11	□□□□□ -1.75
SKO1	YNL167C	RPN4	Q03465	531 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	PPM2	Q08282	695 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	PUS9	Q12069	462 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SKO1	YNL167C	GYP8	P43570	497 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	PUS2	P53167	370 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	LAS17	Q12446	633 aa		4.11	□□□□□ -1.75
SKO1	YNL167C	AIM21	P40563	679 aa		4.1	□□□□□ -1.75
SKO1	YNL167C	REH1	Q06709	432 aa		4.1	□□□□□ -1.75
SKO1	YNL167C	ERR1	P0CX10	437 aa		4.09	□□□□□ -1.75
SKO1	YNL167C	ERR2	P0CX11	437 aa		4.09	□□□□□ -1.75
SKO1	YNL167C	CAD1	P24813	409 aa	Known RBP	4.09	□□□□□ -1.75
SKO1	YNL167C	MSS4	P38994	779 aa		4.09	□□□□□ -1.75
SKO1	YNL167C	AIM39	Q08223	395 aa		4.09	□□□□□ -1.75
SKO1	YNL167C	DAL7	P21826	554 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	CYS3	P31373	394 aa	Known RBP	4.09	□□□□□ -1.76
SKO1	YNL167C	SEC21	P32074	935 aa	Known RBP	4.09	□□□□□ -1.76
SKO1	YNL167C	TIM23	P32897	222 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	YHR078W	P38799	552 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	TAD1	P53065	400 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	ATP25	Q03153	612 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	PNS1	Q12412	539 aa		4.09	□□□□□ -1.76
SKO1	YNL167C	HRR25	P29295	494 aa	Known RBP	4.08	□□□□□ -1.76
SKO1	YNL167C	SPC29	P33419	253 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	BUL1	P48524	976 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	DUS1	P53759	423 aa	Known RBP	4.08	□□□□□ -1.76
SKO1	YNL167C	SLU7	Q02775	382 aa	Known RBP	4.08	□□□□□ -1.76
SKO1	YNL167C	YDR514C	Q04408	483 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	PEX19	Q07418	342 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	HAL9	Q12180	1030 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	SWM1	Q12379	170 aa		4.08	□□□□□ -1.76
SKO1	YNL167C	TRP4	P07285	380 aa	Predicted RBP	4.07	□□□□□ -1.76
SKO1	YNL167C	TUB3	P09734	445 aa	Known RBP	4.07	□□□□□ -1.76
SKO1	YNL167C	EFT1	P32324	842 aa	Known RBP	4.07	□□□□□ -1.76
SKO1	YNL167C	BUD6	P41697	788 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	SUN4	P53616	420 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	DOS2	P54858	310 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	KIN4	Q01919	800 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SKO1	YNL167C	LRS4	Q04087	347 aa	Known RBP	4.07	□□□□□ -1.76
SKO1	YNL167C	YOR022C	Q12204	715 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	TRM11	Q12463	433 aa		4.07	□□□□□ -1.76
SKO1	YNL167C	PRC1	P00729	532 aa		4.06	□□□□□ -1.76
SKO1	YNL167C	CIT2	P08679	460 aa		4.06	□□□□□ -1.76
SKO1	YNL167C	GDH3	P39708	457 aa		4.06	□□□□□ -1.76
SKO1	YNL167C	MET7	Q08645	548 aa		4.06	□□□□□ -1.76
SKO1	YNL167C	CTF13	P35203	478 aa		4.05	□□□□□ -1.76
SKO1	YNL167C	SAP190	P36123	1033 aa		4.05	□□□□□ -1.76
SKO1	YNL167C	KTR4	P38131	464 aa		4.05	□□□□□ -1.76
SKO1	YNL167C	BRN1	P38170	754 aa		4.05	□□□□□ -1.76
SKO1	YNL167C	CHS7	P38843	316 aa		4.05	□□□□□ -1.76
SKO1	YNL167C	SET5	P38890	526 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 77.2 ms