RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP15	YMR304W	FRD1	P32614	470 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	ERC1	P38767	581 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	NMD3	P38861	518 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	PMC1	P38929	1173 aa	Predicted RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	FTR1	P40088	404 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	GYP8	P43570	497 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	KAR5	Q04746	504 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	MRD1	Q06106	887 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	YLH47	Q06493	454 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	VAM6	Q07468	1049 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	SUB2	Q07478	446 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	SUT2	Q12286	268 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	CEX1	Q12453	761 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	HOM2	P13663	365 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	KCC4	P25389	1037 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	DEP1	P31385	405 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	GPT2	P36148	743 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	AMN1	P38285	549 aa	Predicted RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	POP2	P39008	433 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	CCT3	P39077	534 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	YMR124W	P39523	943 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	MEF2	P39677	819 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	DOT6	P40059	670 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	HGH1	P48362	394 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	ISU1	Q03020	165 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	SSQ1	Q05931	657 aa	Predicted RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	RGA2	Q06407	1009 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	ERP4	Q12450	207 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	NKP1	Q12493	238 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	PGK1	P00560	416 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	BIO2	P32451	375 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	GRX7	P38068	203 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	BEM4	P39011	633 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	ACO2	P39533	789 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	NOC2	P39744	710 aa	Known RBP	2.69	□□□□□ -1.98
UBP15	YMR304W	STU2	P46675	888 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	PMT7	Q06644	662 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	YOL057W	Q08225	711 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	YOR131C	Q12486	218 aa		2.69	□□□□□ -1.98
UBP15	YMR304W	SPT3	P06844	337 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	TIF1	P10081	395 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	SEC14	P24280	304 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	EFB1	P32471	206 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	YME2	P32843	850 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	SWH1	P35845	1188 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	ATG14	P38270	344 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	TOM71	P38825	639 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	HAL5	P38970	855 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	RPL34B	P40525	121 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	YRB1	P41920	201 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	IES1	P43579	692 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	CTK3	P46963	296 aa	Predicted RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	TEL2	P53038	688 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	HOS2	P53096	452 aa	Predicted RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	YGL081W	P53156	320 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	ELA1	P53861	379 aa	Predicted RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	CEG1	Q01159	459 aa	Predicted RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	SPO71	Q03868	1245 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	UTP4	Q06679	776 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	IRC10	Q08118	586 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	MRPL7	P36519	292 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	PET100	P38958	111 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	STN1	P38960	494 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	BIM1	P40013	344 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	LAM5	P43560	674 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	YNL034W	P53963	612 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	YNL018C	P53976	612 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	HCR1	Q05775	265 aa	Known RBP	2.68	□□□□□ -1.98
UBP15	YMR304W	SWA2	Q06677	668 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	CDC45	Q08032	650 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	ACF2	Q12168	779 aa		2.68	□□□□□ -1.98
UBP15	YMR304W	STF1	P01098	86 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	TEF1	P02994	458 aa	Known RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	RPS24A	P0CX31	135 aa	Known RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	RPS24B	P0CX32	135 aa	Known RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	UTR2	P32623	467 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	PDR3	P33200	976 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	ALG3	P38179	458 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	TCD1	P38756	429 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	RRM3	P38766	723 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	SYG1	P40528	902 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	ROG3	P43602	733 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	RSM26	P47141	266 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	ATP22	P50273	684 aa	Predicted RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	COG2	P53271	262 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	GIR2	Q03768	265 aa	Predicted RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	PRP42	Q03776	544 aa	Known RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	SSL1	Q04673	461 aa	Predicted RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	SPP382	Q06411	708 aa	Predicted RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	CSR1	Q06705	408 aa	Known RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	ATG9	Q12142	997 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	DPH6	Q12429	685 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	KAR1	P11927	433 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	CDC42	P19073	191 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	IMG2	P25642	146 aa	Predicted RBP	2.67	□□□□□ -1.98
UBP15	YMR304W	PEX5	P35056	612 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	RCN1	P36054	211 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	SOH1	P38633	127 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	MSE1	P48525	536 aa		2.67	□□□□□ -1.98
UBP15	YMR304W	GPI8	P49018	411 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms