RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	SSL1	Q04673	461 aa	Predicted RBP	4	□□□□□ -1.77
TIF11	YMR260C	TYE7	P33122	291 aa	Predicted RBP	3.99	□□□□□ -1.77
TIF11	YMR260C	CTF13	P35203	478 aa		3.99	□□□□□ -1.77
TIF11	YMR260C	VAC8	P39968	578 aa		3.99	□□□□□ -1.77
TIF11	YMR260C	ALD6	P54115	500 aa	Known RBP	3.99	□□□□□ -1.77
TIF11	YMR260C	YKR011C	Q02209	353 aa		3.99	□□□□□ -1.77
TIF11	YMR260C	TDA5	Q06417	326 aa	Known RBP	3.99	□□□□□ -1.77
TIF11	YMR260C	MCH5	Q08777	521 aa		3.99	□□□□□ -1.77
TIF11	YMR260C	TRM11	Q12463	433 aa		3.99	□□□□□ -1.77
TIF11	YMR260C	TUB3	P09734	445 aa	Known RBP	3.98	□□□□□ -1.77
TIF11	YMR260C	REC104	P33323	182 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	TOK1	P40310	691 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	UTP8	P53276	713 aa	Known RBP	3.98	□□□□□ -1.77
TIF11	YMR260C	TIM44	Q01852	431 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	PEX19	Q07418	342 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	FMP25	Q08023	583 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	ACF2	Q12168	779 aa		3.98	□□□□□ -1.77
TIF11	YMR260C	ALG7	P07286	448 aa		3.97	□□□□□ -1.77
TIF11	YMR260C	URA1	P28272	314 aa	Predicted RBP	3.97	□□□□□ -1.77
TIF11	YMR260C	CDC11	P32458	415 aa		3.97	□□□□□ -1.77
TIF11	YMR260C	YIL108W	P40483	696 aa	Known RBP	3.97	□□□□□ -1.77
TIF11	YMR260C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
TIF11	YMR260C	HDA1	P53973	706 aa		3.97	□□□□□ -1.77
TIF11	YMR260C	TMN2	Q04562	672 aa		3.97	□□□□□ -1.77
TIF11	YMR260C	TRM13	Q12383	476 aa		3.97	□□□□□ -1.77
TIF11	YMR260C	RFA1	P22336	621 aa	Known RBP	3.96	□□□□□ -1.78
TIF11	YMR260C	ERT1	P38140	529 aa		3.96	□□□□□ -1.78
TIF11	YMR260C	YBR184W	P38299	523 aa		3.96	□□□□□ -1.78
TIF11	YMR260C	STU2	P46675	888 aa		3.96	□□□□□ -1.78
TIF11	YMR260C	SSF2	Q12153	453 aa	Predicted RBP	3.96	□□□□□ -1.78
TIF11	YMR260C	SWM1	Q12379	170 aa		3.96	□□□□□ -1.78
TIF11	YMR260C	MET3	P08536	511 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	MPH2	P0CD99	609 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	RPD3	P32561	433 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	PAM1	P37304	830 aa	Known RBP	3.95	□□□□□ -1.78
TIF11	YMR260C	YHR078W	P38799	552 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	STB4	P50104	949 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	ASI2	P53895	289 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	IRC10	Q08118	586 aa		3.95	□□□□□ -1.78
TIF11	YMR260C	PET10	P36139	283 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	ELO3	P40319	345 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	DAS1	P47005	663 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	ERP6	P53198	216 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	NAN1	Q02931	896 aa	Known RBP	3.94	□□□□□ -1.78
TIF11	YMR260C	DLT1	Q04216	342 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	FRE5	Q08908	694 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	ENV7	Q12003	364 aa		3.94	□□□□□ -1.78
TIF11	YMR260C	RPL8B	P29453	256 aa	Known RBP	3.93	□□□□□ -1.78
TIF11	YMR260C	ALR2	P43553	858 aa		3.93	□□□□□ -1.78
TIF11	YMR260C	ADY4	Q05955	493 aa		3.93	□□□□□ -1.78
TIF11	YMR260C	MSD1	P15179	658 aa	Known RBP	3.92	□□□□□ -1.78
TIF11	YMR260C	PRP4	P20053	465 aa	Known RBP	3.92	□□□□□ -1.78
TIF11	YMR260C	SDS3	P40505	327 aa		3.92	□□□□□ -1.78
TIF11	YMR260C	CEP3	P40969	608 aa		3.92	□□□□□ -1.78
TIF11	YMR260C	NOG2	P53742	486 aa	Known RBP	3.92	□□□□□ -1.78
TIF11	YMR260C	MUK1	Q02866	612 aa		3.92	□□□□□ -1.78
TIF11	YMR260C	YML122C	Q03207	126 aa		3.92	□□□□□ -1.78
TIF11	YMR260C	HBT1	Q07653	1046 aa	Known RBP	3.92	□□□□□ -1.78
TIF11	YMR260C	HBN1	Q96VH4	193 aa		3.92	□□□□□ -1.78
TIF11	YMR260C	RPS9A	O13516	197 aa	Known RBP	3.91	□□□□□ -1.78
TIF11	YMR260C	CAF20	P12962	161 aa	Known RBP	3.91	□□□□□ -1.78
TIF11	YMR260C	GRX1	P25373	110 aa	Known RBP	3.91	□□□□□ -1.78
TIF11	YMR260C	MTH1	P35198	433 aa		3.91	□□□□□ -1.78
TIF11	YMR260C	YHL017W	P38745	532 aa		3.91	□□□□□ -1.78
TIF11	YMR260C	RPP1	P38786	293 aa		3.91	□□□□□ -1.78
TIF11	YMR260C	ATF1	P40353	525 aa		3.91	□□□□□ -1.78
TIF11	YMR260C	DUS1	P53759	423 aa	Known RBP	3.91	□□□□□ -1.78
TIF11	YMR260C	SPO75	Q07798	868 aa		3.91	□□□□□ -1.78
TIF11	YMR260C	EMC3	P36039	253 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	YBR053C	P38235	358 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	NIT3	P49954	291 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	AMA1	P50082	593 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	PUS2	P53167	370 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	YMR206W	Q03695	313 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	EAF1	Q06337	982 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	WRS1	Q12109	432 aa	Known RBP	3.9	□□□□□ -1.79
TIF11	YMR260C	YPR071W	Q12346	211 aa		3.9	□□□□□ -1.79
TIF11	YMR260C	NGG1	P32494	702 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	PPS1	P38148	807 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	YBR284W	P38150	797 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	FKH2	P41813	862 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	UBP6	P43593	499 aa	Known RBP	3.89	□□□□□ -1.79
TIF11	YMR260C	MRPS35	P53292	345 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	GND2	P53319	492 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	UBX5	Q06682	500 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	HAL9	Q12180	1030 aa		3.89	□□□□□ -1.79
TIF11	YMR260C	SPC42	P36094	363 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	SIC1	P38634	284 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	VHR1	P40522	640 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	YJL049W	P47048	450 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	MUP1	P50276	574 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	PKH1	Q03407	766 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	TAF8	Q03750	510 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	THI21	Q08975	551 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
TIF11	YMR260C	OSH2	Q12451	1283 aa		3.88	□□□□□ -1.79
TIF11	YMR260C	YLR415C	O13578	112 aa		3.87	□□□□□ -1.79
TIF11	YMR260C	TOP3	P13099	656 aa		3.87	□□□□□ -1.79
TIF11	YMR260C	CYS3	P31373	394 aa	Known RBP	3.87	□□□□□ -1.79
TIF11	YMR260C	YIR042C	P40586	236 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 27 ms