RNA–Protein interactions for RNA: YMR135C

GID8, Transcript of Subunit of GID Complex, binds strongly to central component Vid30p, yeastyeast

Gene GID8, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GID8YMR135C URB2P47108 1174 aa9.44□□□□□ -0.9
GID8YMR135C FRA1Q07825 749 aa9.44□□□□□ -0.9
GID8YMR135C TAF10Q12030 206 aa9.44□□□□□ -0.9
GID8YMR135C NCA2Q12374 616 aa9.44□□□□□ -0.9
GID8YMR135C FKS1P38631 1876 aaKnown RBP9.44□□□□□ -0.9
GID8YMR135C YLR462WO13556 202 aa9.43□□□□□ -0.9
GID8YMR135C YME1P32795 747 aa9.43□□□□□ -0.9
GID8YMR135C SQT1P35184 431 aa9.43□□□□□ -0.9
GID8YMR135C PGM2P37012 569 aaKnown RBP9.43□□□□□ -0.9
GID8YMR135C YHL049CP38722 271 aa9.43□□□□□ -0.9
GID8YMR135C YEL075CP39972 122 aa9.43□□□□□ -0.9
GID8YMR135C YER189WP40104 122 aa9.43□□□□□ -0.9
GID8YMR135C ULP2P40537 1034 aaPredicted RBP9.43□□□□□ -0.9
GID8YMR135C YFL064CP43540 174 aa9.43□□□□□ -0.9
GID8YMR135C COS5P47187 383 aa9.43□□□□□ -0.9
GID8YMR135C VPS72Q03388 795 aa9.43□□□□□ -0.9
GID8YMR135C PNP1Q05788 311 aa9.43□□□□□ -0.9
GID8YMR135C RRG1Q12167 365 aaPredicted RBP9.43□□□□□ -0.9
GID8YMR135C YBL111CQ3E7Y5 667 aa9.43□□□□□ -0.9
GID8YMR135C PEP5P12868 1029 aa9.42□□□□□ -0.9
GID8YMR135C PRP22P24384 1145 aaKnown RBP9.42□□□□□ -0.9
GID8YMR135C PLC1P32383 869 aa9.42□□□□□ -0.9
GID8YMR135C YKR018CP36114 725 aa9.42□□□□□ -0.9
GID8YMR135C SAK1P38990 1142 aa9.42□□□□□ -0.9
GID8YMR135C LCB2P40970 561 aa9.42□□□□□ -0.9
GID8YMR135C BRO1P48582 844 aa9.42□□□□□ -0.9
GID8YMR135C FMS1P50264 508 aa9.42□□□□□ -0.9
GID8YMR135C ZPR1P53303 486 aaKnown RBP9.42□□□□□ -0.9
GID8YMR135C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9 RIP-Chip
GID8YMR135C MTG1Q03151 367 aaPredicted RBP9.42□□□□□ -0.9
GID8YMR135C YDR278CQ05612 105 aa9.42□□□□□ -0.9
GID8YMR135C NOB1Q08444 459 aaKnown RBP9.42□□□□□ -0.9
GID8YMR135C ARP6Q12509 438 aa9.42□□□□□ -0.9
GID8YMR135C SEY1Q99287 776 aa9.42□□□□□ -0.9
GID8YMR135C EUG1P32474 517 aa9.41□□□□□ -0.9
GID8YMR135C NIP1P32497 812 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C GCD6P32501 712 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C UGA4P32837 571 aa9.41□□□□□ -0.9
GID8YMR135C RAD54P32863 898 aa9.41□□□□□ -0.9
GID8YMR135C TRZ1P36159 838 aaPredicted RBP9.41□□□□□ -0.9
GID8YMR135C YMR1P47147 688 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
GID8YMR135C DIP5P53388 608 aa9.41□□□□□ -0.9
GID8YMR135C JJJ1P53863 590 aa9.41□□□□□ -0.9
GID8YMR135C RPL22BP56628 122 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C UTP6Q02354 440 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C DPL1Q05567 589 aa9.41□□□□□ -0.9
GID8YMR135C YLR177WQ06251 628 aa9.41□□□□□ -0.9
GID8YMR135C MAG2Q06436 670 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C CMS1Q07897 291 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C RLP24Q07915 199 aaKnown RBP9.41□□□□□ -0.9
GID8YMR135C SNF1P06782 633 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C CAP1P28495 268 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C HEK2P38199 381 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9 RIP-Chip
GID8YMR135C YBR062CP38239 180 aa9.4□□□□□ -0.9
GID8YMR135C ECM2P38241 364 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C RRT2P38332 387 aa9.4□□□□□ -0.9
GID8YMR135C SIC1P38634 284 aa9.4□□□□□ -0.9
GID8YMR135C HIS2P38635 335 aa9.4□□□□□ -0.9
GID8YMR135C KAP123P40069 1113 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C PSY2P40164 858 aa9.4□□□□□ -0.9
GID8YMR135C TDA10P42938 290 aa9.4□□□□□ -0.9
GID8YMR135C CPR6P53691 371 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C ARK1P53974 638 aa9.4□□□□□ -0.9
GID8YMR135C SUB1P54000 292 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C SEN54Q02825 467 aaPredicted RBP9.4□□□□□ -0.9
GID8YMR135C YML082WQ04533 649 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C CUR1Q06469 252 aa9.4□□□□□ -0.9
GID8YMR135C WHI4Q07655 649 aaKnown RBP9.4□□□□□ -0.9
GID8YMR135C HIF1Q12373 385 aa9.4□□□□□ -0.9
GID8YMR135C JIP3O13555 125 aa9.39□□□□□ -0.91
GID8YMR135C SRD1P09007 221 aa9.39□□□□□ -0.91
GID8YMR135C SWI6P09959 803 aa9.39□□□□□ -0.91
GID8YMR135C PHO8P11491 566 aa9.39□□□□□ -0.91
GID8YMR135C SUP45P12385 437 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C KRS1P15180 591 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C ADP1P25371 1049 aa9.39□□□□□ -0.91
GID8YMR135C SEC21P32074 935 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C VPS35P34110 944 aa9.39□□□□□ -0.91
GID8YMR135C YBL028CP38202 106 aa9.39□□□□□ -0.91
GID8YMR135C TIF5P38431 405 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C RIO2P40160 425 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C INA22P40576 216 aa9.39□□□□□ -0.91
GID8YMR135C GPD2P41911 440 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C VPS70P47161 811 aa9.39□□□□□ -0.91
GID8YMR135C MTC3P53077 123 aa9.39□□□□□ -0.91
GID8YMR135C SNU71P53207 620 aaKnown RBP9.39□□□□□ -0.91
GID8YMR135C VPS16Q03308 798 aa9.39□□□□□ -0.91
GID8YMR135C FAR8Q05040 523 aa9.39□□□□□ -0.91
GID8YMR135C LAP2Q10740 671 aa9.39□□□□□ -0.91
GID8YMR135C SEC39Q12745 709 aa9.39□□□□□ -0.91
GID8YMR135C SRV2P17555 526 aaKnown RBP9.38□□□□□ -0.91
GID8YMR135C KIP1P28742 1111 aa9.38□□□□□ -0.91
GID8YMR135C AFG2P32794 780 aa9.38□□□□□ -0.91
GID8YMR135C PGM1P33401 570 aaKnown RBP9.38□□□□□ -0.91
GID8YMR135C EXO5P38289 585 aa9.38□□□□□ -0.91
GID8YMR135C END3P39013 349 aa9.38□□□□□ -0.91
GID8YMR135C SPC72P39723 622 aa9.38□□□□□ -0.91
GID8YMR135C UTP7P40055 554 aaKnown RBP9.38□□□□□ -0.91
GID8YMR135C TMA22P47089 198 aaPredicted RBP9.38□□□□□ -0.91
GID8YMR135C SPC24Q04477 213 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 83.4 ms