RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C SNM1P40993 198 aa5.63□□□□□ -1.51
VPS20YMR077C LGE1Q02796 332 aaKnown RBP5.63□□□□□ -1.51
VPS20YMR077C SWM1Q12379 170 aa5.63□□□□□ -1.51
VPS20YMR077C NPP1P25353 742 aa5.62□□□□□ -1.51
VPS20YMR077C AAR2P32357 355 aaPredicted RBP5.62□□□□□ -1.51
VPS20YMR077C YHL017WP38745 532 aa5.62□□□□□ -1.51
VPS20YMR077C SIT1P39980 628 aa5.62□□□□□ -1.51
VPS20YMR077C CWC24P53769 259 aa5.62□□□□□ -1.51
VPS20YMR077C NDJ1Q12366 352 aa5.62□□□□□ -1.51
VPS20YMR077C MRP8P35719 219 aa5.61□□□□□ -1.51
VPS20YMR077C CTF8P38877 133 aa5.61□□□□□ -1.51
VPS20YMR077C ELO3P40319 345 aa5.61□□□□□ -1.51
VPS20YMR077C YIL108WP40483 696 aaKnown RBP5.61□□□□□ -1.51
VPS20YMR077C SDS3P40505 327 aa5.61□□□□□ -1.51
VPS20YMR077C MAD1P40957 749 aa5.61□□□□□ -1.51
VPS20YMR077C PIN2Q12057 282 aa5.61□□□□□ -1.51
VPS20YMR077C CCM1P48237 864 aaPredicted RBP5.6□□□□□ -1.51
VPS20YMR077C OPI10Q08202 246 aa5.6□□□□□ -1.51
VPS20YMR077C RFA1P22336 621 aaKnown RBP5.59□□□□□ -1.51
VPS20YMR077C TYE7P33122 291 aaPredicted RBP5.59□□□□□ -1.51
VPS20YMR077C AFR1P33304 620 aa5.59□□□□□ -1.51
VPS20YMR077C YRO2P38079 344 aa5.59□□□□□ -1.51
VPS20YMR077C PBY1P38254 753 aa5.59□□□□□ -1.51
VPS20YMR077C TUB3P09734 445 aaKnown RBP5.58□□□□□ -1.52
VPS20YMR077C CAF20P12962 161 aaKnown RBP5.58□□□□□ -1.52
VPS20YMR077C PPS1P38148 807 aa5.58□□□□□ -1.52
VPS20YMR077C ADY4Q05955 493 aa5.58□□□□□ -1.52
VPS20YMR077C RPD3P32561 433 aa5.57□□□□□ -1.52
VPS20YMR077C YKR011CQ02209 353 aa5.57□□□□□ -1.52
VPS20YMR077C SVF1Q05515 481 aa5.57□□□□□ -1.52
VPS20YMR077C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
VPS20YMR077C MRH1Q12117 320 aaPredicted RBP5.56□□□□□ -1.52
VPS20YMR077C RPP1P38786 293 aa5.55□□□□□ -1.52
VPS20YMR077C IRR1P40541 1150 aa5.55□□□□□ -1.52
VPS20YMR077C CEP3P40969 608 aa5.55□□□□□ -1.52
VPS20YMR077C LCD1Q04377 747 aa5.55□□□□□ -1.52
VPS20YMR077C GFA1P14742 717 aaKnown RBP5.54□□□□□ -1.52
VPS20YMR077C YHR078WP38799 552 aa5.54□□□□□ -1.52
VPS20YMR077C PRP9P19736 530 aaKnown RBP5.53□□□□□ -1.52
VPS20YMR077C URA1P28272 314 aaPredicted RBP5.53□□□□□ -1.52
VPS20YMR077C YKL069WP36088 180 aa5.53□□□□□ -1.52
VPS20YMR077C FKH2P41813 862 aa5.53□□□□□ -1.52
VPS20YMR077C AMA1P50082 593 aa5.53□□□□□ -1.52
VPS20YMR077C HDA1P53973 706 aa5.53□□□□□ -1.52
VPS20YMR077C BUL2Q03758 920 aaKnown RBP5.53□□□□□ -1.52
VPS20YMR077C NGG1P32494 702 aa5.52□□□□□ -1.53
VPS20YMR077C REC104P33323 182 aa5.52□□□□□ -1.53
VPS20YMR077C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VPS20YMR077C MUP1P50276 574 aa5.52□□□□□ -1.53
VPS20YMR077C RPS9AO13516 197 aaKnown RBP5.51□□□□□ -1.53
VPS20YMR077C PRI2P20457 528 aa5.51□□□□□ -1.53
VPS20YMR077C CDC43P18898 376 aa5.5□□□□□ -1.53
VPS20YMR077C HCA4P20448 770 aaKnown RBP5.5□□□□□ -1.53
VPS20YMR077C ILV6P25605 309 aaKnown RBP5.5□□□□□ -1.53
VPS20YMR077C TOK1P40310 691 aa5.5□□□□□ -1.53
VPS20YMR077C PUS2P53167 370 aa5.5□□□□□ -1.53
VPS20YMR077C RIA1P53893 1110 aa5.5□□□□□ -1.53
VPS20YMR077C PKH1Q03407 766 aa5.5□□□□□ -1.53
VPS20YMR077C TAF7Q05021 590 aa5.5□□□□□ -1.53
VPS20YMR077C CRR1Q05790 422 aa5.5□□□□□ -1.53
VPS20YMR077C CDC11P32458 415 aa5.49□□□□□ -1.53
VPS20YMR077C VHR1P40522 640 aa5.49□□□□□ -1.53
VPS20YMR077C YJL163CP46996 555 aa5.49□□□□□ -1.53
VPS20YMR077C ASI2P53895 289 aa5.49□□□□□ -1.53
VPS20YMR077C HBS1P32769 611 aaKnown RBP5.48□□□□□ -1.53
VPS20YMR077C YBR053CP38235 358 aa5.48□□□□□ -1.53
VPS20YMR077C TDP1P38319 544 aa5.48□□□□□ -1.53
VPS20YMR077C COQ11Q05892 277 aa5.48□□□□□ -1.53
VPS20YMR077C MPH2P0CD99 609 aa5.47□□□□□ -1.53
VPS20YMR077C PRP4P20053 465 aaKnown RBP5.47□□□□□ -1.53
VPS20YMR077C PPZ2P33329 710 aa5.47□□□□□ -1.53
VPS20YMR077C PCL5P38794 229 aa5.47□□□□□ -1.53
VPS20YMR077C VPS73P53142 486 aaKnown RBP5.47□□□□□ -1.53
VPS20YMR077C MRPS35P53292 345 aa5.47□□□□□ -1.53
VPS20YMR077C SUT2Q12286 268 aa5.47□□□□□ -1.53
VPS20YMR077C PEX2P32800 271 aa5.46□□□□□ -1.54
VPS20YMR077C ERT1P38140 529 aa5.46□□□□□ -1.54
VPS20YMR077C TAH11P47112 604 aa5.46□□□□□ -1.54
VPS20YMR077C IMO32P53219 342 aa5.46□□□□□ -1.54
VPS20YMR077C JIP5Q06214 492 aaPredicted RBP5.46□□□□□ -1.54
VPS20YMR077C TUB1P09733 447 aaKnown RBP5.45□□□□□ -1.54
VPS20YMR077C PZF1P39933 429 aa5.45□□□□□ -1.54
VPS20YMR077C SPF1P39986 1215 aaKnown RBP5.45□□□□□ -1.54
VPS20YMR077C YIR042CP40586 236 aa5.45□□□□□ -1.54
VPS20YMR077C DUS1P53759 423 aaKnown RBP5.45□□□□□ -1.54
VPS20YMR077C KIN3P22209 435 aa5.44□□□□□ -1.54
VPS20YMR077C STE5P32917 917 aa5.44□□□□□ -1.54
VPS20YMR077C YIL166CP40445 542 aa5.44□□□□□ -1.54
VPS20YMR077C NOG2P53742 486 aaKnown RBP5.44□□□□□ -1.54
VPS20YMR077C YNL162W-AQ3E7A8 72 aa5.44□□□□□ -1.54
VPS20YMR077C BNR1P40450 1375 aa5.43□□□□□ -1.54
VPS20YMR077C CYS3P31373 394 aaKnown RBP5.43□□□□□ -1.54
VPS20YMR077C RIX1P38883 763 aaPredicted RBP5.43□□□□□ -1.54
VPS20YMR077C NIT3P49954 291 aa5.43□□□□□ -1.54
VPS20YMR077C HSV2P50079 448 aaPredicted RBP5.43□□□□□ -1.54
VPS20YMR077C NRG1Q03125 231 aa5.43□□□□□ -1.54
VPS20YMR077C HOF1Q05080 669 aa5.43□□□□□ -1.54
VPS20YMR077C TDA5Q06417 326 aaKnown RBP5.43□□□□□ -1.54
VPS20YMR077C SGO1Q08490 590 aa5.43□□□□□ -1.54
VPS20YMR077C YPR071WQ12346 211 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 133.1 ms