RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W REC104P33323 182 aa5.72□□□□□ -1.49
CSM3YMR048W TOK1P40310 691 aa5.72□□□□□ -1.49
CSM3YMR048W SLU7Q02775 382 aaKnown RBP5.72□□□□□ -1.49
CSM3YMR048W SPO75Q07798 868 aa5.72□□□□□ -1.49
CSM3YMR048W TYE7P33122 291 aaPredicted RBP5.71□□□□□ -1.5
CSM3YMR048W SUL1P38359 859 aa5.71□□□□□ -1.5
CSM3YMR048W YIL108WP40483 696 aaKnown RBP5.71□□□□□ -1.5
CSM3YMR048W ALR2P43553 858 aa5.71□□□□□ -1.5
CSM3YMR048W GRX1P25373 110 aaKnown RBP5.7□□□□□ -1.5
CSM3YMR048W CTF8P38877 133 aa5.7□□□□□ -1.5
CSM3YMR048W UBA2P52488 636 aa5.7□□□□□ -1.5
CSM3YMR048W ERG5P54781 538 aa5.7□□□□□ -1.5
CSM3YMR048W YKR011CQ02209 353 aa5.7□□□□□ -1.5
CSM3YMR048W RNT1Q02555 471 aa5.7□□□□□ -1.5
CSM3YMR048W NAN1Q02931 896 aaKnown RBP5.7□□□□□ -1.5
CSM3YMR048W PEX19Q07418 342 aa5.7□□□□□ -1.5
CSM3YMR048W SSF2Q12153 453 aaPredicted RBP5.7□□□□□ -1.5
CSM3YMR048W SEC21P32074 935 aaKnown RBP5.69□□□□□ -1.5
CSM3YMR048W RPD3P32561 433 aa5.69□□□□□ -1.5
CSM3YMR048W ERP6P53198 216 aa5.69□□□□□ -1.5
CSM3YMR048W HDA1P53973 706 aa5.69□□□□□ -1.5
CSM3YMR048W YPR071WQ12346 211 aa5.69□□□□□ -1.5
CSM3YMR048W URA1P28272 314 aaPredicted RBP5.68□□□□□ -1.5
CSM3YMR048W ERT1P38140 529 aa5.68□□□□□ -1.5
CSM3YMR048W CEP3P40969 608 aa5.68□□□□□ -1.5
CSM3YMR048W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
CSM3YMR048W EAF1Q06337 982 aa5.68□□□□□ -1.5
CSM3YMR048W OMS1Q06668 471 aa5.68□□□□□ -1.5
CSM3YMR048W SWM1Q12379 170 aa5.68□□□□□ -1.5
CSM3YMR048W TRM11Q12463 433 aa5.68□□□□□ -1.5
CSM3YMR048W RPL8BP29453 256 aaKnown RBP5.67□□□□□ -1.5
CSM3YMR048W CTF13P35203 478 aa5.67□□□□□ -1.5
CSM3YMR048W PET10P36139 283 aa5.67□□□□□ -1.5
CSM3YMR048W RPS9AO13516 197 aaKnown RBP5.66□□□□□ -1.5
CSM3YMR048W MPH2P0CD99 609 aa5.66□□□□□ -1.5
CSM3YMR048W YBR284WP38150 797 aa5.66□□□□□ -1.5
CSM3YMR048W ACF2Q12168 779 aa5.66□□□□□ -1.5
CSM3YMR048W HBN1Q96VH4 193 aa5.66□□□□□ -1.5
CSM3YMR048W PPR1P07272 904 aaPredicted RBP5.65□□□□□ -1.5
CSM3YMR048W ALG7P07286 448 aa5.65□□□□□ -1.5
CSM3YMR048W TUB3P09734 445 aaKnown RBP5.65□□□□□ -1.5
CSM3YMR048W TIM44Q01852 431 aa5.65□□□□□ -1.5
CSM3YMR048W UBX5Q06682 500 aa5.65□□□□□ -1.5
CSM3YMR048W MCH5Q08777 521 aa5.65□□□□□ -1.5
CSM3YMR048W OSH2Q12451 1283 aa5.65□□□□□ -1.5
CSM3YMR048W YHR078WP38799 552 aa5.64□□□□□ -1.51
CSM3YMR048W PUS2P53167 370 aa5.64□□□□□ -1.51
CSM3YMR048W ENV7Q12003 364 aa5.64□□□□□ -1.51
CSM3YMR048W MET3P08536 511 aa5.63□□□□□ -1.51
CSM3YMR048W MSD1P15179 658 aaKnown RBP5.63□□□□□ -1.51
CSM3YMR048W ARE1P25628 610 aa5.63□□□□□ -1.51
CSM3YMR048W YPT53P36019 220 aa5.63□□□□□ -1.51
CSM3YMR048W NIT3P49954 291 aa5.63□□□□□ -1.51
CSM3YMR048W NOG2P53742 486 aaKnown RBP5.63□□□□□ -1.51
CSM3YMR048W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
CSM3YMR048W DLT1Q04216 342 aa5.63□□□□□ -1.51
CSM3YMR048W HSP60P19882 572 aaKnown RBP5.62□□□□□ -1.51
CSM3YMR048W STB4P50104 949 aa5.62□□□□□ -1.51
CSM3YMR048W TMN2Q04562 672 aa5.62□□□□□ -1.51
CSM3YMR048W RAD4P14736 754 aa5.61□□□□□ -1.51
CSM3YMR048W CYS3P31373 394 aaKnown RBP5.61□□□□□ -1.51
CSM3YMR048W STU2P46675 888 aa5.61□□□□□ -1.51
CSM3YMR048W TRM13Q12383 476 aa5.61□□□□□ -1.51
CSM3YMR048W RPP1P38786 293 aa5.6□□□□□ -1.51
CSM3YMR048W ELO3P40319 345 aa5.6□□□□□ -1.51
CSM3YMR048W UBP6P43593 499 aaKnown RBP5.6□□□□□ -1.51
CSM3YMR048W YJL049WP47048 450 aa5.6□□□□□ -1.51
CSM3YMR048W DUS1P53759 423 aaKnown RBP5.6□□□□□ -1.51
CSM3YMR048W FRE5Q08908 694 aa5.6□□□□□ -1.51
CSM3YMR048W CIT1P00890 479 aa5.59□□□□□ -1.51
CSM3YMR048W NGG1P32494 702 aa5.59□□□□□ -1.51
CSM3YMR048W EMC3P36039 253 aa5.59□□□□□ -1.51
CSM3YMR048W HUL4P40985 892 aa5.59□□□□□ -1.51
CSM3YMR048W QRI1P43123 477 aaKnown RBP5.59□□□□□ -1.51
CSM3YMR048W ASI2P53895 289 aa5.59□□□□□ -1.51
CSM3YMR048W CAF20P12962 161 aaKnown RBP5.58□□□□□ -1.52
CSM3YMR048W VHR1P40522 640 aa5.58□□□□□ -1.52
CSM3YMR048W DAS1P47005 663 aa5.58□□□□□ -1.52
CSM3YMR048W DAM1P53267 343 aa5.58□□□□□ -1.52
CSM3YMR048W PKH1Q03407 766 aa5.58□□□□□ -1.52
CSM3YMR048W YDL124WQ07551 312 aaKnown RBP5.58□□□□□ -1.52
CSM3YMR048W HAL9Q12180 1030 aa5.58□□□□□ -1.52
CSM3YMR048W TOP3P13099 656 aa5.57□□□□□ -1.52
CSM3YMR048W PRP4P20053 465 aaKnown RBP5.57□□□□□ -1.52
CSM3YMR048W PZF1P39933 429 aa5.57□□□□□ -1.52
CSM3YMR048W TIM54P47045 478 aa5.57□□□□□ -1.52
CSM3YMR048W YGR125WP53273 1036 aa5.57□□□□□ -1.52
CSM3YMR048W YMR206WQ03695 313 aa5.57□□□□□ -1.52
CSM3YMR048W ADY4Q05955 493 aa5.57□□□□□ -1.52
CSM3YMR048W FKH2P41813 862 aa5.56□□□□□ -1.52
CSM3YMR048W AMA1P50082 593 aa5.56□□□□□ -1.52
CSM3YMR048W YGR283CP53336 341 aaPredicted RBP5.56□□□□□ -1.52
CSM3YMR048W MUK1Q02866 612 aa5.56□□□□□ -1.52
CSM3YMR048W TAF8Q03750 510 aa5.56□□□□□ -1.52
CSM3YMR048W HBT1Q07653 1046 aaKnown RBP5.56□□□□□ -1.52
CSM3YMR048W IRC10Q08118 586 aa5.56□□□□□ -1.52
CSM3YMR048W DAL7P21826 554 aa5.55□□□□□ -1.52
CSM3YMR048W YHL017WP38745 532 aa5.55□□□□□ -1.52
CSM3YMR048W MUP1P50276 574 aa5.55□□□□□ -1.52
CSM3YMR048W MUS81Q04149 632 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms