RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W CDC6P09119 513 aa6.06□□□□□ -1.44
SPO20YMR017W NIT1P40447 199 aa6.06□□□□□ -1.44
SPO20YMR017W CEP3P40969 608 aa6.06□□□□□ -1.44
SPO20YMR017W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
SPO20YMR017W DOS2P54858 310 aa6.06□□□□□ -1.44
SPO20YMR017W ATP25Q03153 612 aa6.06□□□□□ -1.44
SPO20YMR017W GPB1Q08886 897 aa6.06□□□□□ -1.44
SPO20YMR017W YPL277CQ08989 487 aa6.06□□□□□ -1.44
SPO20YMR017W RPS9AO13516 197 aaKnown RBP6.05□□□□□ -1.44
SPO20YMR017W GSY1P23337 708 aa6.05□□□□□ -1.44
SPO20YMR017W RPD3P32561 433 aa6.05□□□□□ -1.44
SPO20YMR017W ELM1P32801 640 aa6.05□□□□□ -1.44
SPO20YMR017W PEX6P33760 1030 aa6.05□□□□□ -1.44
SPO20YMR017W SPC42P36094 363 aa6.05□□□□□ -1.44
SPO20YMR017W SPT20P50875 604 aa6.05□□□□□ -1.44
SPO20YMR017W TAD1P53065 400 aa6.05□□□□□ -1.44
SPO20YMR017W HDA1P53973 706 aa6.05□□□□□ -1.44
SPO20YMR017W YKR011CQ02209 353 aa6.05□□□□□ -1.44
SPO20YMR017W YDR514CQ04408 483 aa6.05□□□□□ -1.44
SPO20YMR017W REH1Q06709 432 aa6.05□□□□□ -1.44
SPO20YMR017W RXT3Q07458 294 aa6.05□□□□□ -1.44
SPO20YMR017W HMI1Q12039 706 aa6.05□□□□□ -1.44
SPO20YMR017W SOD2P00447 233 aa6.04□□□□□ -1.44
SPO20YMR017W DAL7P21826 554 aa6.04□□□□□ -1.44
SPO20YMR017W RNQ1P25367 405 aa6.04□□□□□ -1.44
SPO20YMR017W EMC1P25574 760 aa6.04□□□□□ -1.44
SPO20YMR017W TYE7P33122 291 aaPredicted RBP6.04□□□□□ -1.44
SPO20YMR017W ATG19P35193 415 aa6.04□□□□□ -1.44
SPO20YMR017W FPR3P38911 411 aaKnown RBP6.04□□□□□ -1.44
SPO20YMR017W MET12P46151 657 aa6.04□□□□□ -1.44
SPO20YMR017W RIM8P53179 542 aa6.04□□□□□ -1.44
SPO20YMR017W VPS62P53285 467 aa6.04□□□□□ -1.44
SPO20YMR017W NOG2P53742 486 aaKnown RBP6.04□□□□□ -1.44
SPO20YMR017W YAP6Q03935 383 aa6.04□□□□□ -1.44
SPO20YMR017W RPP2AP05319 106 aaKnown RBP6.03□□□□□ -1.44
SPO20YMR017W VBA3P25594 458 aa6.03□□□□□ -1.44
SPO20YMR017W TY4A-JP47023 414 aa6.03□□□□□ -1.44
SPO20YMR017W SSL1Q04673 461 aaPredicted RBP6.03□□□□□ -1.44
SPO20YMR017W RSC3Q06639 885 aa6.03□□□□□ -1.44
SPO20YMR017W ACK1Q07622 623 aaPredicted RBP6.03□□□□□ -1.44
SPO20YMR017W WHI4Q07655 649 aaKnown RBP6.03□□□□□ -1.44
SPO20YMR017W CDC9P04819 755 aa6.02□□□□□ -1.45
SPO20YMR017W PRP6P19735 899 aaPredicted RBP6.02□□□□□ -1.45
SPO20YMR017W PER1P25625 357 aa6.02□□□□□ -1.45
SPO20YMR017W YIL108WP40483 696 aaKnown RBP6.02□□□□□ -1.45
SPO20YMR017W PUS2P53167 370 aa6.02□□□□□ -1.45
SPO20YMR017W LRS4Q04087 347 aaKnown RBP6.02□□□□□ -1.45
SPO20YMR017W UTP14Q04500 899 aaKnown RBP6.02□□□□□ -1.45
SPO20YMR017W NOP14Q99207 810 aaKnown RBP6.02□□□□□ -1.45
SPO20YMR017W HIS5P07172 385 aa6.01□□□□□ -1.45
SPO20YMR017W YCL002CP25565 263 aa6.01□□□□□ -1.45
SPO20YMR017W CDC20P26309 610 aa6.01□□□□□ -1.45
SPO20YMR017W CYS3P31373 394 aaKnown RBP6.01□□□□□ -1.45
SPO20YMR017W MTC2P34246 357 aa6.01□□□□□ -1.45
SPO20YMR017W NOP12Q08208 459 aaKnown RBP6.01□□□□□ -1.45
SPO20YMR017W TOD6P34219 525 aa6□□□□□ -1.45
SPO20YMR017W URM1P40554 99 aaPredicted RBP6□□□□□ -1.45
SPO20YMR017W TFB2Q02939 513 aa6□□□□□ -1.45
SPO20YMR017W PRC1P00729 532 aa5.99□□□□□ -1.45
SPO20YMR017W STO1P34160 861 aaKnown RBP5.99□□□□□ -1.45
SPO20YMR017W SAP190P36123 1033 aa5.99□□□□□ -1.45
SPO20YMR017W HAL9Q12180 1030 aa5.99□□□□□ -1.45
SPO20YMR017W YOR022CQ12204 715 aa5.99□□□□□ -1.45
SPO20YMR017W SRD1P09007 221 aa5.98□□□□□ -1.45
SPO20YMR017W FBP1P09201 348 aa5.98□□□□□ -1.45
SPO20YMR017W MCD4P36051 919 aa5.98□□□□□ -1.45
SPO20YMR017W CHA4P43634 648 aa5.98□□□□□ -1.45
SPO20YMR017W ALY2P47029 1046 aa5.98□□□□□ -1.45
SPO20YMR017W YJR142WP47173 342 aa5.98□□□□□ -1.45
SPO20YMR017W HXT16P47185 567 aa5.98□□□□□ -1.45
SPO20YMR017W YLR224WQ05947 369 aa5.98□□□□□ -1.45
SPO20YMR017W UPC2Q12151 913 aa5.98□□□□□ -1.45
SPO20YMR017W YGR161W-CQ3E744 92 aa5.98□□□□□ -1.45
SPO20YMR017W RPL8AP17076 256 aaKnown RBP5.97□□□□□ -1.45
SPO20YMR017W SED4P25365 1065 aa5.97□□□□□ -1.45
SPO20YMR017W SFP1P32432 683 aa5.97□□□□□ -1.45
SPO20YMR017W THI80P35202 319 aa5.97□□□□□ -1.45
SPO20YMR017W CTF8P38877 133 aa5.97□□□□□ -1.45
SPO20YMR017W SET5P38890 526 aaKnown RBP5.97□□□□□ -1.45
SPO20YMR017W RLP7P40693 322 aaKnown RBP5.97□□□□□ -1.45
SPO20YMR017W SHR5P41912 237 aa5.97□□□□□ -1.45
SPO20YMR017W CAF16P43569 289 aa5.97□□□□□ -1.45
SPO20YMR017W DUS1P53759 423 aaKnown RBP5.97□□□□□ -1.45
SPO20YMR017W NPC2Q12408 173 aa5.97□□□□□ -1.45
SPO20YMR017W YBR182C-AQ8TGU6 64 aa5.97□□□□□ -1.45
SPO20YMR017W DIF1O13577 133 aa5.96□□□□□ -1.46
SPO20YMR017W RAD18P10862 487 aa5.96□□□□□ -1.46
SPO20YMR017W PRE10P21242 288 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SPO20YMR017W SDP1P40479 209 aa5.96□□□□□ -1.46
SPO20YMR017W ZDS1P50111 915 aaKnown RBP5.96□□□□□ -1.46
SPO20YMR017W NCS6P53088 359 aa5.96□□□□□ -1.46
SPO20YMR017W DNM1P54861 757 aa5.96□□□□□ -1.46
SPO20YMR017W ADR1P07248 1323 aa5.96□□□□□ -1.46
SPO20YMR017W STE14P32584 239 aa5.95□□□□□ -1.46
SPO20YMR017W PLB1P39105 664 aa5.95□□□□□ -1.46
SPO20YMR017W YNL193WP53870 558 aa5.95□□□□□ -1.46
SPO20YMR017W SNP1Q00916 300 aaPredicted RBP5.95□□□□□ -1.46
SPO20YMR017W TMA10Q06177 86 aa5.95□□□□□ -1.46
SPO20YMR017W YLR001CQ07895 862 aa5.95□□□□□ -1.46
SPO20YMR017W KCS1Q12494 1050 aa5.95□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 113.5 ms