RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W NOT3P06102 836 aaKnown RBP2.52□□□□□ -2.01
PRP39YML046W TUB3P09734 445 aaKnown RBP2.52□□□□□ -2.01
PRP39YML046W YBR053CP38235 358 aa2.52□□□□□ -2.01
PRP39YML046W CBR1P38626 284 aaKnown RBP2.52□□□□□ -2.01
PRP39YML046W SSF1P38789 453 aaPredicted RBP2.52□□□□□ -2.01
PRP39YML046W GYP7P48365 746 aa2.52□□□□□ -2.01
PRP39YML046W YGR053CP53234 283 aa2.52□□□□□ -2.01
PRP39YML046W MRPS35P53292 345 aa2.52□□□□□ -2.01
PRP39YML046W SSL1Q04673 461 aaPredicted RBP2.52□□□□□ -2.01
PRP39YML046W HOM2P13663 365 aaKnown RBP2.51□□□□□ -2.01
PRP39YML046W CDC12P32468 407 aaKnown RBP2.51□□□□□ -2.01
PRP39YML046W RPP1P38786 293 aa2.51□□□□□ -2.01
PRP39YML046W SNF7P39929 240 aaKnown RBP2.51□□□□□ -2.01
PRP39YML046W PTP1P25044 335 aa2.5□□□□□ -2.01
PRP39YML046W TYW3P53177 273 aa2.5□□□□□ -2.01
PRP39YML046W MPS1P54199 764 aa2.5□□□□□ -2.01
PRP39YML046W VPS30Q02948 557 aa2.5□□□□□ -2.01
PRP39YML046W FBP1P09201 348 aa2.5□□□□□ -2.01
PRP39YML046W SEC20P28791 383 aa2.5□□□□□ -2.01
PRP39YML046W YJL206CP39529 758 aa2.5□□□□□ -2.01
PRP39YML046W BNA3P47039 444 aaKnown RBP2.5□□□□□ -2.01
PRP39YML046W AMA1P50082 593 aa2.5□□□□□ -2.01
PRP39YML046W SSL2Q00578 843 aa2.5□□□□□ -2.01
PRP39YML046W TDA9Q04545 1251 aa2.5□□□□□ -2.01
PRP39YML046W SGO1Q08490 590 aa2.5□□□□□ -2.01
PRP39YML046W RPN13O13563 156 aa2.49□□□□□ -2.01
PRP39YML046W MCM2P29469 868 aa2.49□□□□□ -2.01
PRP39YML046W STE13P33894 931 aa2.49□□□□□ -2.01
PRP39YML046W CTF8P38877 133 aa2.49□□□□□ -2.01
PRP39YML046W YKR078WP36158 585 aaKnown RBP2.48□□□□□ -2.01
PRP39YML046W YEL020CP39994 560 aa2.48□□□□□ -2.01
PRP39YML046W ESF1Q06344 628 aaKnown RBP2.48□□□□□ -2.01
PRP39YML046W IRC13Q08630 104 aa2.48□□□□□ -2.01
PRP39YML046W CDC48P25694 835 aaKnown RBP2.48□□□□□ -2.01
PRP39YML046W EMP70P32802 667 aa2.48□□□□□ -2.01
PRP39YML046W LTP1P40347 161 aa2.48□□□□□ -2.01
PRP39YML046W YIL108WP40483 696 aaKnown RBP2.48□□□□□ -2.01
PRP39YML046W NET1P47035 1189 aa2.48□□□□□ -2.01
PRP39YML046W EEB1Q02891 456 aa2.48□□□□□ -2.01
PRP39YML046W SPO20Q04359 397 aa2.48□□□□□ -2.01
PRP39YML046W TAF3Q12297 353 aa2.48□□□□□ -2.01
PRP39YML046W RPD3P32561 433 aa2.47□□□□□ -2.01
PRP39YML046W TSL1P38427 1098 aaKnown RBP2.47□□□□□ -2.01
PRP39YML046W SMX3P54999 86 aaPredicted RBP2.47□□□□□ -2.01
PRP39YML046W VPS34P22543 875 aa2.46□□□□□ -2.02
PRP39YML046W TEL2P53038 688 aa2.46□□□□□ -2.02
PRP39YML046W SPR28Q04921 423 aa2.46□□□□□ -2.02
PRP39YML046W YLR225CQ05948 407 aaKnown RBP2.46□□□□□ -2.02
PRP39YML046W HIS7P33734 552 aaKnown RBP2.45□□□□□ -2.02
PRP39YML046W PIN4P34217 668 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
PRP39YML046W FMP52P40008 231 aa2.45□□□□□ -2.02
PRP39YML046W YIR042CP40586 236 aa2.45□□□□□ -2.02
PRP39YML046W CCT7P42943 550 aaKnown RBP2.45□□□□□ -2.02
PRP39YML046W HSV2P50079 448 aaPredicted RBP2.45□□□□□ -2.02
PRP39YML046W DUS3Q06053 668 aaKnown RBP2.45□□□□□ -2.02
PRP39YML046W YLR149CQ99296 730 aa2.45□□□□□ -2.02
PRP39YML046W DUT1P33317 147 aa2.45□□□□□ -2.02
PRP39YML046W MGE1P38523 228 aa2.45□□□□□ -2.02
PRP39YML046W MEP2P41948 499 aa2.45□□□□□ -2.02
PRP39YML046W OSW1Q08692 278 aa2.45□□□□□ -2.02
PRP39YML046W STE4P18851 423 aa2.44□□□□□ -2.02
PRP39YML046W PRP4P20053 465 aaKnown RBP2.44□□□□□ -2.02
PRP39YML046W YBR238CP38330 731 aaKnown RBP2.44□□□□□ -2.02
PRP39YML046W GGA2P38817 585 aaKnown RBP2.44□□□□□ -2.02
PRP39YML046W YKE2P52553 114 aa2.44□□□□□ -2.02
PRP39YML046W CIR2Q08822 631 aa2.44□□□□□ -2.02
PRP39YML046W TYE7P33122 291 aaPredicted RBP2.43□□□□□ -2.02
PRP39YML046W YHR078WP38799 552 aa2.43□□□□□ -2.02
PRP39YML046W IPL1P38991 367 aa2.43□□□□□ -2.02
PRP39YML046W RSP5P39940 809 aaKnown RBP2.43□□□□□ -2.02
PRP39YML046W VHR1P40522 640 aa2.43□□□□□ -2.02
PRP39YML046W PKH1Q03407 766 aa2.43□□□□□ -2.02
PRP39YML046W XBP1P40489 647 aa2.43□□□□□ -2.02
PRP39YML046W ASI2P53895 289 aa2.43□□□□□ -2.02
PRP39YML046W BCD1P38772 366 aa2.42□□□□□ -2.02
PRP39YML046W PAC2P39937 518 aa2.42□□□□□ -2.02
PRP39YML046W NDC80P40460 691 aa2.42□□□□□ -2.02
PRP39YML046W MPH2P0CD99 609 aa2.41□□□□□ -2.02
PRP39YML046W ERG11P10614 530 aa2.41□□□□□ -2.02
PRP39YML046W LAT1P12695 482 aaKnown RBP2.41□□□□□ -2.02
PRP39YML046W CDC34P14682 295 aa2.41□□□□□ -2.02
PRP39YML046W FYV10P40492 516 aa2.41□□□□□ -2.02
PRP39YML046W YKR011CQ02209 353 aa2.41□□□□□ -2.02
PRP39YML046W NRG1Q03125 231 aa2.41□□□□□ -2.02
PRP39YML046W NOP1P15646 327 aaKnown RBP2.41□□□□□ -2.02
PRP39YML046W RFA1P22336 621 aaKnown RBP2.41□□□□□ -2.02
PRP39YML046W NGG1P32494 702 aa2.41□□□□□ -2.02
PRP39YML046W YAP1802P53309 568 aa2.41□□□□□ -2.02
PRP39YML046W ESC2Q06340 456 aa2.41□□□□□ -2.02
PRP39YML046W NPP1P25353 742 aa2.4□□□□□ -2.03
PRP39YML046W BDH2P39713 417 aa2.4□□□□□ -2.03
PRP39YML046W ASM4Q05166 528 aa2.4□□□□□ -2.03
PRP39YML046W PGK1P00560 416 aaKnown RBP2.39□□□□□ -2.03
PRP39YML046W CLN2P20438 545 aa2.39□□□□□ -2.03
PRP39YML046W PPH3P32345 308 aa2.39□□□□□ -2.03
PRP39YML046W MBP1P39678 833 aa2.39□□□□□ -2.03
PRP39YML046W MET10P39692 1035 aa2.39□□□□□ -2.03
PRP39YML046W CEP3P40969 608 aa2.39□□□□□ -2.03
PRP39YML046W MRK1P50873 501 aa2.39□□□□□ -2.03
PRP39YML046W HRB1P38922 454 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms