RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C USA1Q03714 838 aa7.77□□□□□ -1.17
AFG2YLR397C VPS64Q03944 604 aa7.77□□□□□ -1.17
AFG2YLR397C BNR1P40450 1375 aa7.76□□□□□ -1.17
AFG2YLR397C SSK22P25390 1331 aaPredicted RBP7.76□□□□□ -1.17
AFG2YLR397C PGK1P00560 416 aaKnown RBP7.76□□□□□ -1.17
AFG2YLR397C YHI9P38765 294 aa7.76□□□□□ -1.17
AFG2YLR397C FCY21P40039 528 aa7.76□□□□□ -1.17
AFG2YLR397C FTR1P40088 404 aa7.76□□□□□ -1.17
AFG2YLR397C PDS1P40316 373 aaPredicted RBP7.76□□□□□ -1.17
AFG2YLR397C YTA12P40341 825 aa7.76□□□□□ -1.17
AFG2YLR397C RIC1P40395 1056 aa7.76□□□□□ -1.17
AFG2YLR397C ESL1P40456 1118 aa7.76□□□□□ -1.17
AFG2YLR397C NAF1P53919 492 aaKnown RBP7.76□□□□□ -1.17
AFG2YLR397C SSB1P11484 613 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C VMA1P17255 1071 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C OCA5P38738 679 aa7.75□□□□□ -1.17
AFG2YLR397C SSB2P40150 613 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17not detected
AFG2YLR397C SNZ3P43545 298 aa7.75□□□□□ -1.17
AFG2YLR397C KEL2P50090 882 aa7.75□□□□□ -1.17
AFG2YLR397C SNZ2P53824 298 aa7.75□□□□□ -1.17
AFG2YLR397C YDR179W-AQ03983 463 aa7.75□□□□□ -1.17
AFG2YLR397C GYP5Q12344 894 aa7.75□□□□□ -1.17
AFG2YLR397C SPS1P08458 490 aa7.75□□□□□ -1.17
AFG2YLR397C MAK16P10962 306 aaPredicted RBP7.75□□□□□ -1.17
AFG2YLR397C YAP1P19880 650 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C RAD57P25301 460 aa7.75□□□□□ -1.17
AFG2YLR397C MGM1P32266 881 aa7.75□□□□□ -1.17
AFG2YLR397C SSE1P32589 693 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C MRP8P35719 219 aa7.75□□□□□ -1.17
AFG2YLR397C MAL33P38157 468 aa7.75□□□□□ -1.17
AFG2YLR397C IFA38P38286 347 aa7.75□□□□□ -1.17
AFG2YLR397C SDH8P38345 138 aa7.75□□□□□ -1.17
AFG2YLR397C SSF1P38789 453 aaPredicted RBP7.75□□□□□ -1.17
AFG2YLR397C MKT1P40850 830 aaKnown RBP7.75□□□□□ -1.17
AFG2YLR397C IOC3P43596 787 aa7.75□□□□□ -1.17
AFG2YLR397C YJR008WP47085 338 aa7.75□□□□□ -1.17
AFG2YLR397C VAC14Q06708 880 aa7.75□□□□□ -1.17
AFG2YLR397C UIP4Q08926 304 aa7.75□□□□□ -1.17
AFG2YLR397C PHO84P25297 587 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C DUR3P33413 735 aa7.74□□□□□ -1.17
AFG2YLR397C PCF11P39081 626 aaPredicted RBP7.74□□□□□ -1.17
AFG2YLR397C TIF4631P39935 952 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C MEP1P40260 492 aa7.74□□□□□ -1.17
AFG2YLR397C PHB1P40961 287 aa7.74□□□□□ -1.17
AFG2YLR397C MNN11P46985 422 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C MEC3Q02574 474 aa7.74□□□□□ -1.17
AFG2YLR397C GCN3P14741 305 aa7.74□□□□□ -1.17
AFG2YLR397C YCR016WP25617 290 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C SUV3P32580 737 aa7.74□□□□□ -1.17
AFG2YLR397C NFU1P32860 256 aa7.74□□□□□ -1.17
AFG2YLR397C SHM1P37292 490 aaPredicted RBP7.74□□□□□ -1.17
AFG2YLR397C CCT2P39076 527 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C BOL3P39724 118 aa7.74□□□□□ -1.17
AFG2YLR397C EDC3P39998 551 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C YER034WP40022 185 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C SNZ1Q03148 297 aa7.74□□□□□ -1.17
AFG2YLR397C NOB1Q08444 459 aaKnown RBP7.74□□□□□ -1.17
AFG2YLR397C NUR1Q12066 484 aa7.74□□□□□ -1.17
AFG2YLR397C PWP1P21304 576 aaKnown RBP7.73□□□□□ -1.17
AFG2YLR397C PAT1P25644 796 aaKnown RBP7.73□□□□□ -1.17
AFG2YLR397C MCM4P30665 933 aaKnown RBP7.73□□□□□ -1.17
AFG2YLR397C SMI1P32566 505 aa7.73□□□□□ -1.17
AFG2YLR397C PXA2P34230 853 aa7.73□□□□□ -1.17
AFG2YLR397C OAF3P36023 863 aa7.73□□□□□ -1.17
AFG2YLR397C URB2P47108 1174 aa7.73□□□□□ -1.17
AFG2YLR397C YPT11P48559 417 aa7.73□□□□□ -1.17
AFG2YLR397C PAN2P53010 1115 aaPredicted RBP7.73□□□□□ -1.17
AFG2YLR397C ARV1Q06541 321 aa7.73□□□□□ -1.17
AFG2YLR397C NOP6Q07623 225 aaKnown RBP7.73□□□□□ -1.17
AFG2YLR397C MEU1Q07938 337 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
AFG2YLR397C PEX15Q08215 383 aa7.73□□□□□ -1.17
AFG2YLR397C PHO13P19881 312 aa7.73□□□□□ -1.17
AFG2YLR397C RPB4P20433 221 aaPredicted RBP7.73□□□□□ -1.17
AFG2YLR397C MIA40P36046 403 aa7.73□□□□□ -1.17
AFG2YLR397C MRX3P38172 270 aa7.73□□□□□ -1.17
AFG2YLR397C PFF1P38244 976 aa7.73□□□□□ -1.17
AFG2YLR397C RPN10P38886 268 aaKnown RBP7.73□□□□□ -1.17
AFG2YLR397C SNL1P40548 159 aa7.73□□□□□ -1.17
AFG2YLR397C TFG2P41896 400 aaPredicted RBP7.73□□□□□ -1.17
AFG2YLR397C HOP2P53187 214 aa7.73□□□□□ -1.17
AFG2YLR397C PTA1Q01329 785 aaPredicted RBP7.73□□□□□ -1.17
AFG2YLR397C GLO2Q05584 274 aa7.73□□□□□ -1.17
AFG2YLR397C PIG1Q06216 648 aa7.73□□□□□ -1.17
AFG2YLR397C SCM3Q12334 223 aa7.73□□□□□ -1.17
AFG2YLR397C TUS1Q06412 1307 aa7.73□□□□□ -1.17
AFG2YLR397C ACH1P32316 526 aa7.72□□□□□ -1.17
AFG2YLR397C IRE1P32361 1115 aa7.72□□□□□ -1.17
AFG2YLR397C SMC1P32908 1225 aa7.72□□□□□ -1.17
AFG2YLR397C DAN4P47179 1161 aa7.72□□□□□ -1.17
AFG2YLR397C GCV2P49095 1034 aa7.72□□□□□ -1.17
AFG2YLR397C BSC5P53755 489 aa7.72□□□□□ -1.17
AFG2YLR397C CEG1Q01159 459 aaPredicted RBP7.72□□□□□ -1.17
AFG2YLR397C GPN2Q08726 347 aaPredicted RBP7.72□□□□□ -1.17
AFG2YLR397C MEF1P25039 761 aa7.72□□□□□ -1.17
AFG2YLR397C BUD16P39988 312 aa7.72□□□□□ -1.17
AFG2YLR397C SAP185P40856 1058 aa7.72□□□□□ -1.17
AFG2YLR397C ECM11Q04110 302 aa7.72□□□□□ -1.17
AFG2YLR397C HFD1Q04458 532 aa7.72□□□□□ -1.17
AFG2YLR397C YCS4Q06156 1176 aa7.72□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms