RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W SED4P25365 1065 aa5.39□□□□□ -1.55
SMD2YLR275W UBP6P43593 499 aaKnown RBP5.39□□□□□ -1.55
SMD2YLR275W ENV7Q12003 364 aa5.39□□□□□ -1.55
SMD2YLR275W TOM70P07213 617 aaKnown RBP5.38□□□□□ -1.55
SMD2YLR275W MPH2P0CD99 609 aa5.38□□□□□ -1.55
SMD2YLR275W URA1P28272 314 aaPredicted RBP5.38□□□□□ -1.55
SMD2YLR275W RPD3P32561 433 aa5.38□□□□□ -1.55
SMD2YLR275W TYE7P33122 291 aaPredicted RBP5.38□□□□□ -1.55
SMD2YLR275W GGA2P38817 585 aaKnown RBP5.38□□□□□ -1.55
SMD2YLR275W RSP5P39940 809 aaKnown RBP5.38□□□□□ -1.55
SMD2YLR275W YIL108WP40483 696 aaKnown RBP5.38□□□□□ -1.55
SMD2YLR275W CEP3P40969 608 aa5.38□□□□□ -1.55
SMD2YLR275W YOL098CQ12496 1037 aa5.38□□□□□ -1.55
SMD2YLR275W CAN1P04817 590 aa5.37□□□□□ -1.55
SMD2YLR275W PFK1P16861 987 aaKnown RBP5.37□□□□□ -1.55
SMD2YLR275W GAL11P19659 1081 aa5.37□□□□□ -1.55
SMD2YLR275W PMI40P29952 429 aaKnown RBP5.37□□□□□ -1.55
SMD2YLR275W STE14P32584 239 aa5.37□□□□□ -1.55
SMD2YLR275W BET3P36149 193 aa5.37□□□□□ -1.55
SMD2YLR275W NIT3P49954 291 aa5.37□□□□□ -1.55
SMD2YLR275W HDA1P53973 706 aa5.37□□□□□ -1.55
SMD2YLR275W YKR011CQ02209 353 aa5.37□□□□□ -1.55
SMD2YLR275W URN1Q06525 465 aaKnown RBP5.37□□□□□ -1.55
SMD2YLR275W ENB1Q08299 606 aa5.37□□□□□ -1.55
SMD2YLR275W GUP2Q08929 609 aa5.37□□□□□ -1.55
SMD2YLR275W RPS9AO13516 197 aaKnown RBP5.36□□□□□ -1.55
SMD2YLR275W FBP1P09201 348 aa5.36□□□□□ -1.55
SMD2YLR275W KAR4P25583 335 aa5.36□□□□□ -1.55
SMD2YLR275W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SMD2YLR275W DEF1P35732 738 aaKnown RBP5.35□□□□□ -1.55
SMD2YLR275W OCA5P38738 679 aa5.35□□□□□ -1.55
SMD2YLR275W SDP1P40479 209 aa5.35□□□□□ -1.55
SMD2YLR275W MSE1P48525 536 aa5.35□□□□□ -1.55
SMD2YLR275W RTA1P53047 317 aa5.35□□□□□ -1.55
SMD2YLR275W YOR131CQ12486 218 aa5.35□□□□□ -1.55
SMD2YLR275W CAD1P24813 409 aaKnown RBP5.34□□□□□ -1.55
SMD2YLR275W SRP40P32583 406 aaPredicted RBP5.34□□□□□ -1.55
SMD2YLR275W CTF8P38877 133 aa5.34□□□□□ -1.55
SMD2YLR275W AIM21P40563 679 aa5.34□□□□□ -1.55
SMD2YLR275W PUS2P53167 370 aa5.34□□□□□ -1.55
SMD2YLR275W PUS9Q12069 462 aa5.34□□□□□ -1.55
SMD2YLR275W LAS17Q12446 633 aa5.34□□□□□ -1.55
SMD2YLR275W EMC3P36039 253 aa5.33□□□□□ -1.56
SMD2YLR275W GYP8P43570 497 aa5.33□□□□□ -1.56
SMD2YLR275W ALG2P43636 503 aa5.33□□□□□ -1.56
SMD2YLR275W YGR283CP53336 341 aaPredicted RBP5.33□□□□□ -1.56
SMD2YLR275W NOG2P53742 486 aaKnown RBP5.33□□□□□ -1.56
SMD2YLR275W CYS3P31373 394 aaKnown RBP5.32□□□□□ -1.56
SMD2YLR275W MSS4P38994 779 aa5.32□□□□□ -1.56
SMD2YLR275W DAM1P53267 343 aa5.32□□□□□ -1.56
SMD2YLR275W SUN4P53616 420 aa5.32□□□□□ -1.56
SMD2YLR275W AIM39Q08223 395 aa5.32□□□□□ -1.56
SMD2YLR275W DAL7P21826 554 aa5.31□□□□□ -1.56
SMD2YLR275W HRR25P29295 494 aaKnown RBP5.31□□□□□ -1.56
SMD2YLR275W SEC21P32074 935 aaKnown RBP5.31□□□□□ -1.56
SMD2YLR275W YKL091CP33324 310 aaKnown RBP5.31□□□□□ -1.56
SMD2YLR275W CHZ1P40019 153 aaPredicted RBP5.31□□□□□ -1.56
SMD2YLR275W SLU7Q02775 382 aaKnown RBP5.31□□□□□ -1.56
SMD2YLR275W PPM2Q08282 695 aa5.31□□□□□ -1.56
SMD2YLR275W PNS1Q12412 539 aa5.31□□□□□ -1.56
SMD2YLR275W PHR1P05066 565 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SMD2YLR275W YHR078WP38799 552 aa5.3□□□□□ -1.56
SMD2YLR275W TAD1P53065 400 aa5.3□□□□□ -1.56
SMD2YLR275W KIN4Q01919 800 aa5.3□□□□□ -1.56
SMD2YLR275W RPN4Q03465 531 aa5.3□□□□□ -1.56
SMD2YLR275W PEX19Q07418 342 aa5.3□□□□□ -1.56
SMD2YLR275W HAL9Q12180 1030 aa5.3□□□□□ -1.56
SMD2YLR275W BUL1P48524 976 aa5.29□□□□□ -1.56
SMD2YLR275W DUS1P53759 423 aaKnown RBP5.29□□□□□ -1.56
SMD2YLR275W YDR514CQ04408 483 aa5.29□□□□□ -1.56
SMD2YLR275W REH1Q06709 432 aa5.29□□□□□ -1.56
SMD2YLR275W SWM1Q12379 170 aa5.29□□□□□ -1.56
SMD2YLR275W TRP4P07285 380 aaPredicted RBP5.28□□□□□ -1.56
SMD2YLR275W TUB3P09734 445 aaKnown RBP5.28□□□□□ -1.56
SMD2YLR275W EFT1P32324 842 aaKnown RBP5.28□□□□□ -1.56
SMD2YLR275W PBP2P38151 413 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SMD2YLR275W LRS4Q04087 347 aaKnown RBP5.28□□□□□ -1.56
SMD2YLR275W MET7Q08645 548 aa5.28□□□□□ -1.56
SMD2YLR275W YOR022CQ12204 715 aa5.28□□□□□ -1.56
SMD2YLR275W PRC1P00729 532 aa5.27□□□□□ -1.57
SMD2YLR275W ERR1P0CX10 437 aa5.27□□□□□ -1.57
SMD2YLR275W ERR2P0CX11 437 aa5.27□□□□□ -1.57
SMD2YLR275W YCL002CP25565 263 aa5.27□□□□□ -1.57
SMD2YLR275W SPC29P33419 253 aa5.27□□□□□ -1.57
SMD2YLR275W SAP190P36123 1033 aa5.27□□□□□ -1.57
SMD2YLR275W ATP25Q03153 612 aa5.27□□□□□ -1.57
SMD2YLR275W TIM23P32897 222 aa5.26□□□□□ -1.57
SMD2YLR275W CHS7P38843 316 aa5.26□□□□□ -1.57
SMD2YLR275W GDH3P39708 457 aa5.26□□□□□ -1.57
SMD2YLR275W BUD6P41697 788 aa5.26□□□□□ -1.57
SMD2YLR275W TRM11Q12463 433 aa5.26□□□□□ -1.57
SMD2YLR275W RAD53P22216 821 aa5.25□□□□□ -1.57
SMD2YLR275W CTF13P35203 478 aa5.25□□□□□ -1.57
SMD2YLR275W KTR4P38131 464 aa5.25□□□□□ -1.57
SMD2YLR275W VHR1P40522 640 aa5.25□□□□□ -1.57
SMD2YLR275W HSV2P50079 448 aaPredicted RBP5.25□□□□□ -1.57
SMD2YLR275W SLI1P53304 468 aa5.25□□□□□ -1.57
SMD2YLR275W ERG5P54781 538 aa5.25□□□□□ -1.57
SMD2YLR275W YLR040CQ07988 224 aa5.25□□□□□ -1.57
SMD2YLR275W ERG4P25340 473 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms