RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ADE12P80210 433 aaKnown RBP2.54□□□□□ -2
VPS13YLL040C ARO80Q04052 950 aa2.54□□□□□ -2
VPS13YLL040C YLR297WQ05899 129 aa2.54□□□□□ -2
VPS13YLL040C BDF2Q07442 638 aa2.54□□□□□ -2
VPS13YLL040C MDM38Q08179 573 aa2.54□□□□□ -2
VPS13YLL040C AI2P03876 854 aa2.54□□□□□ -2
VPS13YLL040C COX11P19516 300 aaKnown RBP2.54□□□□□ -2
VPS13YLL040C SIN4P32259 974 aa2.54□□□□□ -2
VPS13YLL040C FUI1P38196 639 aa2.54□□□□□ -2
VPS13YLL040C YBR259WP38338 688 aa2.54□□□□□ -2
VPS13YLL040C REI1P38344 393 aaPredicted RBP2.54□□□□□ -2
VPS13YLL040C ERP2P39704 215 aa2.54□□□□□ -2
VPS13YLL040C CCM1P48237 864 aaPredicted RBP2.54□□□□□ -2
VPS13YLL040C CWC22P53333 577 aaKnown RBP2.54□□□□□ -2
VPS13YLL040C YNL035CP53962 389 aaKnown RBP2.54□□□□□ -2
VPS13YLL040C FAR8Q05040 523 aa2.54□□□□□ -2
VPS13YLL040C GCR1P07261 785 aa2.53□□□□□ -2
VPS13YLL040C TUB3P09734 445 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C NPP2P39997 493 aa2.53□□□□□ -2
VPS13YLL040C GCN20P43535 752 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C URB2P47108 1174 aa2.53□□□□□ -2
VPS13YLL040C SHE9Q04172 456 aa2.53□□□□□ -2
VPS13YLL040C FMP42Q04991 504 aa2.53□□□□□ -2
VPS13YLL040C VIP1Q06685 1146 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C SIL1Q08199 421 aa2.53□□□□□ -2
VPS13YLL040C YPL277CQ08989 487 aa2.53□□□□□ -2
VPS13YLL040C CIT1P00890 479 aa2.53□□□□□ -2
VPS13YLL040C YPK1P12688 680 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C APL2P36000 726 aaPredicted RBP2.53□□□□□ -2
VPS13YLL040C TRZ1P36159 838 aaPredicted RBP2.53□□□□□ -2
VPS13YLL040C ERG7P38604 731 aa2.53□□□□□ -2
VPS13YLL040C SMC5Q08204 1093 aa2.53□□□□□ -2
VPS13YLL040C MGM1P32266 881 aa2.53□□□□□ -2
VPS13YLL040C SMF1P38925 575 aa2.53□□□□□ -2
VPS13YLL040C YHB1P39676 399 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C HMF1P40037 129 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C TMA108P40462 946 aa2.53□□□□□ -2
VPS13YLL040C FIS1P40515 155 aa2.53□□□□□ -2
VPS13YLL040C INP51P40559 946 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C BRE5P53741 515 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C UBX4P54730 416 aa2.53□□□□□ -2
VPS13YLL040C MET14Q02196 202 aa2.53□□□□□ -2
VPS13YLL040C RPS6AP0CX37 236 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C RPS6BP0CX38 236 aaPredicted RBP2.53□□□□□ -2
VPS13YLL040C RAM2P29703 316 aa2.53□□□□□ -2
VPS13YLL040C SAP1P39955 897 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C SLX8P40072 274 aa2.53□□□□□ -2
VPS13YLL040C ATG3P40344 310 aa2.53□□□□□ -2
VPS13YLL040C RRB1Q04225 511 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C YMR074CQ04773 145 aa2.53□□□□□ -2
VPS13YLL040C KRS1P15180 591 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C LCB1P25045 558 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C BIO2P32451 375 aa2.53□□□□□ -2
VPS13YLL040C RAD54P32863 898 aa2.53□□□□□ -2
VPS13YLL040C RGD1P38339 666 aa2.53□□□□□ -2
VPS13YLL040C SET5P38890 526 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C LYS14P40971 790 aa2.53□□□□□ -2
VPS13YLL040C YGR054WP53235 642 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C PGA2P53903 129 aa2.53□□□□□ -2
VPS13YLL040C GPR1Q12361 961 aa2.53□□□□□ -2
VPS13YLL040C HKR1P41809 1802 aa2.53□□□□□ -2
VPS13YLL040C PSO2P30620 661 aa2.53□□□□□ -2
VPS13YLL040C SRP101P32916 621 aa2.53□□□□□ -2
VPS13YLL040C FYV10P40492 516 aa2.53□□□□□ -2
VPS13YLL040C HXT10P43581 546 aa2.53□□□□□ -2
VPS13YLL040C FRK1Q03002 865 aaPredicted RBP2.53□□□□□ -2
VPS13YLL040C NBA1Q08229 501 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C YPL225WQ08971 146 aaKnown RBP2.53□□□□□ -2
VPS13YLL040C SEY1Q99287 776 aa2.53□□□□□ -2
VPS13YLL040C SPO12P17123 173 aa2.53□□□□□ -2.01
VPS13YLL040C IMP2'P32351 346 aa2.53□□□□□ -2.01
VPS13YLL040C MRE11P32829 692 aa2.53□□□□□ -2.01
VPS13YLL040C YBL036CP38197 257 aa2.53□□□□□ -2.01
VPS13YLL040C VID27P40157 782 aa2.53□□□□□ -2.01
VPS13YLL040C SEC9P40357 651 aa2.53□□□□□ -2.01
VPS13YLL040C PHO86P46956 311 aa2.53□□□□□ -2.01
VPS13YLL040C DAS1P47005 663 aa2.53□□□□□ -2.01
VPS13YLL040C RPC17P47076 161 aa2.53□□□□□ -2.01
VPS13YLL040C RPA49Q01080 415 aaPredicted RBP2.53□□□□□ -2.01
VPS13YLL040C RRP17Q04031 235 aaPredicted RBP2.53□□□□□ -2.01
VPS13YLL040C ERB1Q04660 807 aaKnown RBP2.53□□□□□ -2.01
VPS13YLL040C TYW1Q08960 810 aaKnown RBP2.53□□□□□ -2.01
VPS13YLL040C CBP2P03874 630 aaPredicted RBP2.52□□□□□ -2.01
VPS13YLL040C YSC83P32792 385 aa2.52□□□□□ -2.01
VPS13YLL040C TBS1P38114 1094 aa2.52□□□□□ -2.01
VPS13YLL040C TAF6P53040 516 aa2.52□□□□□ -2.01
VPS13YLL040C SVL3Q03088 825 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C PUS1Q12211 544 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C OAF3P36023 863 aa2.52□□□□□ -2.01
VPS13YLL040C PCH2P38126 564 aa2.52□□□□□ -2.01
VPS13YLL040C YBR241CP38142 488 aa2.52□□□□□ -2.01
VPS13YLL040C SPL2P38839 148 aa2.52□□□□□ -2.01
VPS13YLL040C FOL1P53848 824 aa2.52□□□□□ -2.01
VPS13YLL040C KAP95Q06142 861 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C YDL114WQ07530 308 aa2.52□□□□□ -2.01
VPS13YLL040C DUR3P33413 735 aa2.52□□□□□ -2.01
VPS13YLL040C FZO1P38297 855 aa2.52□□□□□ -2.01
VPS13YLL040C SSZ1P38788 538 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C RRP8P38961 392 aaKnown RBP2.52□□□□□ -2.01
VPS13YLL040C END3P39013 349 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms