RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C UTP14Q04500 899 aaKnown RBP12.75□□□□□ -0.37
YKR040CYKR040C TCO89Q08921 799 aa12.75□□□□□ -0.37
YKR040CYKR040C YPL216WQ08964 1102 aa12.75□□□□□ -0.37
YKR040CYKR040C TRK2P28584 889 aa12.74□□□□□ -0.37
YKR040CYKR040C RPT1P33299 467 aaKnown RBP12.74□□□□□ -0.37
YKR040CYKR040C MRPL7P36519 292 aa12.74□□□□□ -0.37
YKR040CYKR040C RSM25P40496 264 aa12.74□□□□□ -0.37
YKR040CYKR040C MET13P53128 600 aa12.74□□□□□ -0.37
YKR040CYKR040C SHS1Q07657 551 aa12.74□□□□□ -0.37
YKR040CYKR040C CDC53Q12018 815 aaKnown RBP12.74□□□□□ -0.37
YKR040CYKR040C YOR022CQ12204 715 aa12.74□□□□□ -0.37
YKR040CYKR040C MED1Q12321 566 aa12.74□□□□□ -0.37
YKR040CYKR040C AIM44Q99299 758 aa12.74□□□□□ -0.37
YKR040CYKR040C SCP160P06105 1222 aaKnown RBP RIP-Chip data12.73□□□□□ -0.37not detected
YKR040CYKR040C RSA4P25382 515 aaKnown RBP12.73□□□□□ -0.37
YKR040CYKR040C MMS4P38257 691 aa12.73□□□□□ -0.37
YKR040CYKR040C PNG1Q02890 363 aa12.73□□□□□ -0.37
YKR040CYKR040C HEH2Q03281 663 aa12.73□□□□□ -0.37
YKR040CYKR040C TAF13P11747 167 aa12.72□□□□□ -0.37
YKR040CYKR040C ADK2P26364 225 aa12.72□□□□□ -0.37
YKR040CYKR040C YDR034W-BQ6Q5X2 51 aa12.72□□□□□ -0.37
YKR040CYKR040C TRS33Q99394 268 aa12.72□□□□□ -0.37
YKR040CYKR040C PRC1P00729 532 aa12.71□□□□□ -0.37
YKR040CYKR040C OM45P16547 393 aa12.71□□□□□ -0.37
YKR040CYKR040C PRR1P28708 518 aa12.71□□□□□ -0.37
YKR040CYKR040C MUD1P32605 298 aaKnown RBP12.71□□□□□ -0.37
YKR040CYKR040C YER186CP40101 306 aa12.71□□□□□ -0.37
YKR040CYKR040C TOS3P43637 560 aa12.71□□□□□ -0.37
YKR040CYKR040C ASN1P49089 572 aaKnown RBP12.71□□□□□ -0.37
YKR040CYKR040C ALG11P53954 548 aaKnown RBP12.71□□□□□ -0.37
YKR040CYKR040C SPP382Q06411 708 aaPredicted RBP12.71□□□□□ -0.37
YKR040CYKR040C LCB2P40970 561 aa12.7□□□□□ -0.38
YKR040CYKR040C HSH155P49955 971 aaKnown RBP12.7□□□□□ -0.38
YKR040CYKR040C CWC21Q03375 135 aaKnown RBP12.7□□□□□ -0.38
YKR040CYKR040C AFT2Q08957 416 aa12.7□□□□□ -0.38
YKR040CYKR040C URK1P27515 501 aa12.69□□□□□ -0.38
YKR040CYKR040C PSO2P30620 661 aa12.69□□□□□ -0.38
YKR040CYKR040C BCD1P38772 366 aa12.69□□□□□ -0.38
YKR040CYKR040C YHR202WP38887 602 aa12.69□□□□□ -0.38
YKR040CYKR040C RVS167P39743 482 aaKnown RBP12.69□□□□□ -0.38
YKR040CYKR040C YGR237CP50089 785 aa12.69□□□□□ -0.38
YKR040CYKR040C INP52P50942 1183 aa12.69□□□□□ -0.38
YKR040CYKR040C LSC2P53312 427 aa12.69□□□□□ -0.38
YKR040CYKR040C ESC8Q08119 714 aa12.69□□□□□ -0.38
YKR040CYKR040C YOL075CQ08234 1294 aa12.69□□□□□ -0.38
YKR040CYKR040C OSH2Q12451 1283 aa12.69□□□□□ -0.38
YKR040CYKR040C RPL4AP10664 362 aaKnown RBP12.68□□□□□ -0.38
YKR040CYKR040C POL3P15436 1097 aa12.68□□□□□ -0.38
YKR040CYKR040C VMA1P17255 1071 aaKnown RBP12.68□□□□□ -0.38
YKR040CYKR040C MSP1P28737 362 aa12.68□□□□□ -0.38
YKR040CYKR040C SEC21P32074 935 aaKnown RBP12.68□□□□□ -0.38
YKR040CYKR040C TRM2P33753 639 aa12.68□□□□□ -0.38
YKR040CYKR040C XDJ1P39102 459 aa12.68□□□□□ -0.38
YKR040CYKR040C NPP2P39997 493 aa12.68□□□□□ -0.38
YKR040CYKR040C FAF1P40546 346 aaPredicted RBP12.68□□□□□ -0.38
YKR040CYKR040C RPL4BP49626 362 aaKnown RBP12.68□□□□□ -0.38
YKR040CYKR040C YGR130CP53278 816 aa12.68□□□□□ -0.38
YKR040CYKR040C SPO71Q03868 1245 aa12.68□□□□□ -0.38
YKR040CYKR040C MLH2Q07980 695 aa12.68□□□□□ -0.38
YKR040CYKR040C PKH2Q12236 1081 aaKnown RBP12.68□□□□□ -0.38
YKR040CYKR040C MAK16P10962 306 aaPredicted RBP12.67□□□□□ -0.38
YKR040CYKR040C SSB1P11484 613 aaKnown RBP12.67□□□□□ -0.38
YKR040CYKR040C CHS2P14180 963 aa12.67□□□□□ -0.38
YKR040CYKR040C BIO2P32451 375 aa12.67□□□□□ -0.38
YKR040CYKR040C PIN4P34217 668 aaKnown RBP RIP-Chip data12.67□□□□□ -0.38not detected
YKR040CYKR040C HEL1P36113 551 aa12.67□□□□□ -0.38
YKR040CYKR040C RFS1P38234 210 aaKnown RBP12.67□□□□□ -0.38
YKR040CYKR040C SSB2P40150 613 aaKnown RBP12.67□□□□□ -0.38
YKR040CYKR040C YFL052WP43551 465 aa12.67□□□□□ -0.38
YKR040CYKR040C ULI1P43604 169 aa12.67□□□□□ -0.38
YKR040CYKR040C TIM8P57744 87 aa12.67□□□□□ -0.38
YKR040CYKR040C DON1Q05610 365 aa12.67□□□□□ -0.38
YKR040CYKR040C RLP24Q07915 199 aaKnown RBP12.67□□□□□ -0.38
YKR040CYKR040C DNL4Q08387 944 aaPredicted RBP12.67□□□□□ -0.38
YKR040CYKR040C PUS1Q12211 544 aaKnown RBP12.67□□□□□ -0.38
YKR040CYKR040C GSY2P27472 705 aa12.66□□□□□ -0.38
YKR040CYKR040C CCL1P37366 393 aa12.66□□□□□ -0.38
YKR040CYKR040C NPR3P38742 1146 aa12.66□□□□□ -0.38
YKR040CYKR040C RRM3P38766 723 aa12.66□□□□□ -0.38
YKR040CYKR040C SGT2Q12118 346 aaKnown RBP12.66□□□□□ -0.38
YKR040CYKR040C ASP3-2P0CX77 362 aa12.65□□□□□ -0.38
YKR040CYKR040C ASP3-3P0CX78 362 aa12.65□□□□□ -0.38
YKR040CYKR040C ASP3-4P0CX79 362 aa12.65□□□□□ -0.38
YKR040CYKR040C ASP3-1P0CZ17 362 aa12.65□□□□□ -0.38
YKR040CYKR040C IME2P32581 645 aa12.65□□□□□ -0.38
YKR040CYKR040C MNR2P35724 969 aa12.65□□□□□ -0.38
YKR040CYKR040C UBP5P39944 805 aa12.65□□□□□ -0.38
YKR040CYKR040C STB4P50104 949 aa12.65□□□□□ -0.38
YKR040CYKR040C YNL034WP53963 612 aa12.65□□□□□ -0.38
YKR040CYKR040C YNL018CP53976 612 aa12.65□□□□□ -0.38
YKR040CYKR040C EEB1Q02891 456 aa12.65□□□□□ -0.38
YKR040CYKR040C RPN12P32496 274 aa12.64□□□□□ -0.39
YKR040CYKR040C RAD54P32863 898 aa12.64□□□□□ -0.39
YKR040CYKR040C MMF1P40185 145 aaKnown RBP12.64□□□□□ -0.39
YKR040CYKR040C KRE33P53914 1056 aaKnown RBP12.64□□□□□ -0.39
YKR040CYKR040C GIR2Q03768 265 aaPredicted RBP12.64□□□□□ -0.39
YKR040CYKR040C SDH5Q08230 162 aa12.64□□□□□ -0.39
YKR040CYKR040C MRN1Q08925 612 aaKnown RBP RIP-Chip data12.64□□□□□ -0.39not detected
YKR040CYKR040C REC8Q12188 680 aa12.64□□□□□ -0.39
YKR040CYKR040C YMR084WA2P2R3 262 aa12.63□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 85 ms