RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W SWI6P09959 803 aa12.69□□□□□ -0.38
TCD2YKL027W CHS2P14180 963 aa12.69□□□□□ -0.38
TCD2YKL027W FUB1P25659 250 aa12.69□□□□□ -0.38
TCD2YKL027W APL1P27351 700 aa12.69□□□□□ -0.38
TCD2YKL027W POT1P27796 417 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38not detected
TCD2YKL027W MUD1P32605 298 aaKnown RBP12.69□□□□□ -0.38
TCD2YKL027W MRX3P38172 270 aa12.69□□□□□ -0.38
TCD2YKL027W VID24P38263 362 aa12.69□□□□□ -0.38
TCD2YKL027W EFM2P38347 419 aa12.69□□□□□ -0.38
TCD2YKL027W SPT8P38915 602 aa12.69□□□□□ -0.38
TCD2YKL027W NPP2P39997 493 aa12.69□□□□□ -0.38
TCD2YKL027W SCD6P45978 349 aaKnown RBP RIP-Chip data12.69□□□□□ -0.38 RIP-Chip
TCD2YKL027W COS5P47187 383 aa12.69□□□□□ -0.38
TCD2YKL027W TPO2P53283 614 aa12.69□□□□□ -0.38
TCD2YKL027W TIM8P57744 87 aa12.69□□□□□ -0.38
TCD2YKL027W MUK1Q02866 612 aa12.69□□□□□ -0.38
TCD2YKL027W TVP23P38962 199 aa12.68□□□□□ -0.38
TCD2YKL027W INP51P40559 946 aaKnown RBP12.68□□□□□ -0.38
TCD2YKL027W FIG4P42837 879 aa12.68□□□□□ -0.38
TCD2YKL027W FYV8P46949 817 aaKnown RBP12.68□□□□□ -0.38
TCD2YKL027W ORC5P50874 479 aa12.68□□□□□ -0.38
TCD2YKL027W TRS130Q03660 1102 aa12.68□□□□□ -0.38
TCD2YKL027W UTP14Q04500 899 aaKnown RBP12.68□□□□□ -0.38
TCD2YKL027W SPO75Q07798 868 aa12.68□□□□□ -0.38
TCD2YKL027W VPS13Q07878 3144 aa12.68□□□□□ -0.38
TCD2YKL027W MSH3P25336 1018 aa12.67□□□□□ -0.38
TCD2YKL027W MMS4P38257 691 aa12.67□□□□□ -0.38
TCD2YKL027W MIP6P38760 659 aaKnown RBP12.67□□□□□ -0.38
TCD2YKL027W ASN1P49089 572 aaKnown RBP12.67□□□□□ -0.38
TCD2YKL027W FAL1Q12099 399 aaKnown RBP12.67□□□□□ -0.38
TCD2YKL027W SSB1P11484 613 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W ADE2P21264 571 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W SPO11P23179 398 aa12.66□□□□□ -0.38
TCD2YKL027W RPC25P35718 212 aa12.66□□□□□ -0.38
TCD2YKL027W GRS1P38088 690 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W YAP1801P38856 637 aa12.66□□□□□ -0.38
TCD2YKL027W SSB2P40150 613 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W HSH155P49955 971 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W YNL134CP53912 376 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W DOT1Q04089 582 aaKnown RBP12.66□□□□□ -0.38
TCD2YKL027W DRE2P36152 348 aa12.65□□□□□ -0.38
TCD2YKL027W BRL1P38770 471 aa12.65□□□□□ -0.38
TCD2YKL027W ISM1P48526 1002 aa12.65□□□□□ -0.38
TCD2YKL027W VPS75P53853 264 aa12.65□□□□□ -0.38
TCD2YKL027W PCD1Q12524 340 aa12.65□□□□□ -0.38
TCD2YKL027W TAO3P40468 2376 aa12.65□□□□□ -0.38
TCD2YKL027W GLN3P18494 730 aa12.64□□□□□ -0.39
TCD2YKL027W PHO13P19881 312 aa12.64□□□□□ -0.39
TCD2YKL027W MAC1P35192 417 aa12.64□□□□□ -0.39
TCD2YKL027W EBP2P36049 427 aaKnown RBP12.64□□□□□ -0.39
TCD2YKL027W POA1P38218 177 aa12.64□□□□□ -0.39
TCD2YKL027W LAM5P43560 674 aa12.64□□□□□ -0.39
TCD2YKL027W RPS6AP0CX37 236 aaKnown RBP12.63□□□□□ -0.39
TCD2YKL027W RPS6BP0CX38 236 aaPredicted RBP12.63□□□□□ -0.39
TCD2YKL027W NAT1P12945 854 aaKnown RBP12.63□□□□□ -0.39
TCD2YKL027W PIN4P34217 668 aaKnown RBP RIP-Chip data12.63□□□□□ -0.39not detected
TCD2YKL027W SHM1P37292 490 aaPredicted RBP12.63□□□□□ -0.39
TCD2YKL027W SPO74P45819 413 aa12.63□□□□□ -0.39
TCD2YKL027W GCV2P49095 1034 aa12.63□□□□□ -0.39
TCD2YKL027W YNL115CP53925 644 aa12.63□□□□□ -0.39
TCD2YKL027W SHS1Q07657 551 aa12.63□□□□□ -0.39
TCD2YKL027W PLP2Q12017 286 aa12.63□□□□□ -0.39
TCD2YKL027W ZPS1Q12512 249 aa12.63□□□□□ -0.39
TCD2YKL027W SEC65P29478 273 aa12.62□□□□□ -0.39
TCD2YKL027W RPT1P33299 467 aaKnown RBP12.62□□□□□ -0.39
TCD2YKL027W FTR1P40088 404 aa12.62□□□□□ -0.39
TCD2YKL027W FOL2P51601 243 aaKnown RBP12.62□□□□□ -0.39
TCD2YKL027W ALT2P52892 507 aa12.62□□□□□ -0.39
TCD2YKL027W YGR035CP53222 116 aa12.62□□□□□ -0.39
TCD2YKL027W YLR297WQ05899 129 aa12.62□□□□□ -0.39
TCD2YKL027W CWC2Q12046 339 aaPredicted RBP12.62□□□□□ -0.39
TCD2YKL027W COX4P04037 155 aa12.62□□□□□ -0.39
TCD2YKL027W TIF1P10081 395 aaKnown RBP12.62□□□□□ -0.39
TCD2YKL027W TRM2P33753 639 aa12.62□□□□□ -0.39
TCD2YKL027W YKL023WP36103 277 aaKnown RBP12.62□□□□□ -0.39
TCD2YKL027W LEO1P38439 464 aa12.62□□□□□ -0.39
TCD2YKL027W SGT2Q12118 346 aaKnown RBP12.62□□□□□ -0.39
TCD2YKL027W TOM70P07213 617 aaKnown RBP12.61□□□□□ -0.39
TCD2YKL027W MCM2P29469 868 aa12.61□□□□□ -0.39
TCD2YKL027W PXL1P36166 706 aa12.61□□□□□ -0.39
TCD2YKL027W UBX7P38349 436 aa12.61□□□□□ -0.39
TCD2YKL027W YHL026CP38740 315 aa12.61□□□□□ -0.39
TCD2YKL027W CLA4P48562 842 aa12.61□□□□□ -0.39
TCD2YKL027W SWI3P32591 825 aa12.6□□□□□ -0.39
TCD2YKL027W SDS3P40505 327 aa12.6□□□□□ -0.39
TCD2YKL027W HFM1P51979 1187 aa12.6□□□□□ -0.39
TCD2YKL027W YGR130CP53278 816 aa12.6□□□□□ -0.39
TCD2YKL027W RPA49Q01080 415 aaPredicted RBP12.6□□□□□ -0.39
TCD2YKL027W YLR287CQ05881 355 aa12.6□□□□□ -0.39
TCD2YKL027W CSR1Q06705 408 aaKnown RBP12.6□□□□□ -0.39
TCD2YKL027W ADE4P04046 510 aaKnown RBP12.59□□□□□ -0.39
TCD2YKL027W VFA1P40080 203 aa12.59□□□□□ -0.39
TCD2YKL027W DAS1P47005 663 aa12.59□□□□□ -0.39
TCD2YKL027W SKY1Q03656 742 aa12.59□□□□□ -0.39
TCD2YKL027W MAG2Q06436 670 aaKnown RBP12.59□□□□□ -0.39
TCD2YKL027W SLX4Q12098 748 aa12.59□□□□□ -0.39
TCD2YKL027W GIS3Q12418 502 aa12.59□□□□□ -0.39
TCD2YKL027W RPL4AP10664 362 aaKnown RBP12.58□□□□□ -0.4
TCD2YKL027W PRR1P28708 518 aa12.58□□□□□ -0.4
TCD2YKL027W SMC3P47037 1230 aa12.58□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 169.5 ms