RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W BUD6P41697 788 aa6.23□□□□□ -1.41
CBF1YJR060W SLS1P42900 643 aa6.23□□□□□ -1.41
CBF1YJR060W HUL5P53119 910 aa6.23□□□□□ -1.41
CBF1YJR060W DOT1Q04089 582 aaKnown RBP6.23□□□□□ -1.41
CBF1YJR060W INM2Q05533 292 aa6.23□□□□□ -1.41
CBF1YJR060W SNF3P10870 884 aa6.22□□□□□ -1.41
CBF1YJR060W RPT3P33298 428 aaKnown RBP6.22□□□□□ -1.41
CBF1YJR060W KTR3P38130 404 aaPredicted RBP6.22□□□□□ -1.41
CBF1YJR060W RFC1P38630 861 aaKnown RBP6.22□□□□□ -1.41
CBF1YJR060W AKR1P39010 764 aa6.22□□□□□ -1.41
CBF1YJR060W PIP2P52960 996 aa6.22□□□□□ -1.41
CBF1YJR060W YGR053CP53234 283 aa6.22□□□□□ -1.41
CBF1YJR060W NAN1Q02931 896 aaKnown RBP6.22□□□□□ -1.41
CBF1YJR060W NKP2Q06162 153 aa6.22□□□□□ -1.41
CBF1YJR060W OPI10Q08202 246 aa6.22□□□□□ -1.41
CBF1YJR060W AVO1Q08236 1176 aa6.22□□□□□ -1.41
CBF1YJR060W RTT10Q08924 1013 aa6.22□□□□□ -1.41
CBF1YJR060W NAM7P30771 971 aaKnown RBP6.21□□□□□ -1.42
CBF1YJR060W GPT2P36148 743 aa6.21□□□□□ -1.42
CBF1YJR060W NEM1P38757 446 aa6.21□□□□□ -1.42
CBF1YJR060W PIC2P40035 300 aa6.21□□□□□ -1.42
CBF1YJR060W MSH4P40965 878 aaPredicted RBP6.21□□□□□ -1.42
CBF1YJR060W TIM54P47045 478 aa6.21□□□□□ -1.42
CBF1YJR060W ALO1P54783 526 aaKnown RBP6.21□□□□□ -1.42
CBF1YJR060W FAL1Q12099 399 aaKnown RBP6.21□□□□□ -1.42
CBF1YJR060W GCR1P07261 785 aa6.2□□□□□ -1.42
CBF1YJR060W VMA4P22203 233 aaKnown RBP6.2□□□□□ -1.42
CBF1YJR060W DUT1P33317 147 aa6.2□□□□□ -1.42
CBF1YJR060W PBY1P38254 753 aa6.2□□□□□ -1.42
CBF1YJR060W ATG14P38270 344 aa6.2□□□□□ -1.42
CBF1YJR060W TAT2P38967 592 aa6.2□□□□□ -1.42
CBF1YJR060W SPF1P39986 1215 aaKnown RBP6.2□□□□□ -1.42
CBF1YJR060W IRC8P47046 822 aa6.2□□□□□ -1.42
CBF1YJR060W YGL140CP53120 1219 aa6.2□□□□□ -1.42
CBF1YJR060W POB3Q04636 552 aaKnown RBP6.2□□□□□ -1.42
CBF1YJR060W GIC2Q06648 383 aa6.2□□□□□ -1.42
CBF1YJR060W MET6P05694 767 aaKnown RBP6.19□□□□□ -1.42
CBF1YJR060W CBP1P07252 654 aa6.19□□□□□ -1.42
CBF1YJR060W TPM1P17536 199 aaKnown RBP6.19□□□□□ -1.42
CBF1YJR060W PGM1P33401 570 aaKnown RBP6.19□□□□□ -1.42
CBF1YJR060W SAF1P38352 637 aa6.19□□□□□ -1.42
CBF1YJR060W YMR147WP40218 223 aaKnown RBP6.19□□□□□ -1.42
CBF1YJR060W YIL089WP40500 205 aa6.19□□□□□ -1.42
CBF1YJR060W MTC3P53077 123 aa6.19□□□□□ -1.42
CBF1YJR060W RRT6P53117 311 aaPredicted RBP6.19□□□□□ -1.42
CBF1YJR060W YGR045CP53229 120 aa6.19□□□□□ -1.42
CBF1YJR060W MRPS35P53292 345 aa6.19□□□□□ -1.42
CBF1YJR060W ELA1P53861 379 aaPredicted RBP6.19□□□□□ -1.42
CBF1YJR060W MRL1Q06815 381 aa6.19□□□□□ -1.42
CBF1YJR060W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
CBF1YJR060W TMA46Q12000 345 aaKnown RBP6.19□□□□□ -1.42
CBF1YJR060W SBP1P10080 294 aaKnown RBP6.18□□□□□ -1.42
CBF1YJR060W OPI1P21957 404 aa6.18□□□□□ -1.42
CBF1YJR060W RAD27P26793 382 aa6.18□□□□□ -1.42
CBF1YJR060W GRX7P38068 203 aa6.18□□□□□ -1.42
CBF1YJR060W NUP82P40368 713 aa6.18□□□□□ -1.42
CBF1YJR060W NIT1P40447 199 aa6.18□□□□□ -1.42
CBF1YJR060W NOP2P40991 618 aaKnown RBP6.18□□□□□ -1.42
CBF1YJR060W UTP5Q04177 643 aaKnown RBP6.18□□□□□ -1.42
CBF1YJR060W CSR2Q12734 1121 aa6.18□□□□□ -1.42
CBF1YJR060W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
CBF1YJR060W VAS1P07806 1104 aaKnown RBP6.17□□□□□ -1.42
CBF1YJR060W CHS2P14180 963 aa6.17□□□□□ -1.42
CBF1YJR060W SEC23P15303 768 aaKnown RBP6.17□□□□□ -1.42
CBF1YJR060W BAS1P22035 811 aa6.17□□□□□ -1.42
CBF1YJR060W TSR4P25040 408 aa6.17□□□□□ -1.42
CBF1YJR060W YKL069WP36088 180 aa6.17□□□□□ -1.42
CBF1YJR060W KAE1P36132 386 aa6.17□□□□□ -1.42
CBF1YJR060W ETP1P38748 585 aaKnown RBP6.17□□□□□ -1.42
CBF1YJR060W RRP8P38961 392 aaKnown RBP6.17□□□□□ -1.42
CBF1YJR060W SPO74P45819 413 aa6.17□□□□□ -1.42
CBF1YJR060W YNR063WP53749 607 aa6.17□□□□□ -1.42
CBF1YJR060W PCL8Q08966 492 aa6.17□□□□□ -1.42
CBF1YJR060W TAH18Q12181 623 aa6.17□□□□□ -1.42
CBF1YJR060W ADP1P25371 1049 aa6.16□□□□□ -1.42
CBF1YJR060W YAR028WP39548 234 aa6.16□□□□□ -1.42
CBF1YJR060W TYW3P53177 273 aa6.16□□□□□ -1.42
CBF1YJR060W YPL260WQ08977 551 aa6.16□□□□□ -1.42
CBF1YJR060W RIM20Q12033 661 aa6.16□□□□□ -1.42
CBF1YJR060W YLR122CQ12312 125 aa6.16□□□□□ -1.42
CBF1YJR060W PMA1P05030 918 aaKnown RBP6.15□□□□□ -1.42
CBF1YJR060W HEM13P11353 328 aaKnown RBP6.15□□□□□ -1.42
CBF1YJR060W RAD53P22216 821 aa6.15□□□□□ -1.42
CBF1YJR060W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
CBF1YJR060W RDH54P38086 958 aa6.15□□□□□ -1.42
CBF1YJR060W MNN1P39106 762 aa6.15□□□□□ -1.42
CBF1YJR060W KRI1P42846 591 aaKnown RBP6.15□□□□□ -1.42
CBF1YJR060W LAP2Q10740 671 aa6.15□□□□□ -1.42
CBF1YJR060W GIN4Q12263 1142 aa6.15□□□□□ -1.42
CBF1YJR060W YGR161W-CQ3E744 92 aa6.15□□□□□ -1.42
CBF1YJR060W LAM4P38800 1345 aa6.15□□□□□ -1.43
CBF1YJR060W RPS4AP0CX35 261 aaKnown RBP6.14□□□□□ -1.43
CBF1YJR060W RPS4BP0CX36 261 aaKnown RBP6.14□□□□□ -1.43
CBF1YJR060W PHO8P11491 566 aa6.14□□□□□ -1.43
CBF1YJR060W TIM23P32897 222 aa6.14□□□□□ -1.43
CBF1YJR060W NNK1P36003 928 aa6.14□□□□□ -1.43
CBF1YJR060W ADD66P36040 267 aa6.14□□□□□ -1.43
CBF1YJR060W AAP1P37898 856 aaKnown RBP6.14□□□□□ -1.43
CBF1YJR060W RTS1P38903 757 aa6.14□□□□□ -1.43
CBF1YJR060W PES4P39684 611 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms