RNA–Protein interactions for RNA: YJR022W

LSM8, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM8, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM8YJR022W PBP1P53297 722 aaKnown RBP3.67□□□□□ -1.82
LSM8YJR022W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
LSM8YJR022W ROD1Q02805 837 aa3.67□□□□□ -1.82
LSM8YJR022W YLR224WQ05947 369 aa3.67□□□□□ -1.82
LSM8YJR022W YDL124WQ07551 312 aaKnown RBP3.67□□□□□ -1.82
LSM8YJR022W YLR001CQ07895 862 aa3.67□□□□□ -1.82
LSM8YJR022W YPL066WQ12194 479 aa3.67□□□□□ -1.82
LSM8YJR022W PEP1P32319 1579 aa3.67□□□□□ -1.82
LSM8YJR022W NUP145P49687 1317 aa3.67□□□□□ -1.82
LSM8YJR022W KAR1P11927 433 aa3.66□□□□□ -1.82
LSM8YJR022W DCG1P32460 244 aa3.66□□□□□ -1.82
LSM8YJR022W MKK2P32491 506 aa3.66□□□□□ -1.82
LSM8YJR022W DEF1P35732 738 aaKnown RBP3.66□□□□□ -1.82
LSM8YJR022W YFL054CP43549 646 aa3.66□□□□□ -1.82
LSM8YJR022W YJR120WP47157 116 aa3.66□□□□□ -1.82
LSM8YJR022W TIF35Q04067 274 aaKnown RBP3.66□□□□□ -1.82
LSM8YJR022W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
LSM8YJR022W YPL260WQ08977 551 aa3.66□□□□□ -1.82
LSM8YJR022W RKM4Q12504 494 aa3.66□□□□□ -1.82
LSM8YJR022W ESP1Q03018 1630 aa3.66□□□□□ -1.82
LSM8YJR022W THO2P53552 1597 aaKnown RBP3.65□□□□□ -1.82
LSM8YJR022W SSK2P53599 1579 aa3.65□□□□□ -1.82
LSM8YJR022W DED1P06634 604 aaKnown RBP3.65□□□□□ -1.83
LSM8YJR022W PIN4P34217 668 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
LSM8YJR022W MSS4P38994 779 aa3.65□□□□□ -1.83
LSM8YJR022W MBP1P39678 833 aa3.65□□□□□ -1.83
LSM8YJR022W GEM1P39722 662 aa3.65□□□□□ -1.83
LSM8YJR022W HLJ1P48353 224 aa3.65□□□□□ -1.83
LSM8YJR022W GTF1P53260 183 aaPredicted RBP3.65□□□□□ -1.83
LSM8YJR022W YNL193WP53870 558 aa3.65□□□□□ -1.83
LSM8YJR022W SVL3Q03088 825 aaKnown RBP3.65□□□□□ -1.83
LSM8YJR022W ECM16Q04217 1267 aaKnown RBP3.65□□□□□ -1.83
LSM8YJR022W HMI1Q12039 706 aa3.65□□□□□ -1.83
LSM8YJR022W SLX4Q12098 748 aa3.65□□□□□ -1.83
LSM8YJR022W NKP1Q12493 238 aa3.65□□□□□ -1.83
LSM8YJR022W TMA7Q3E764 64 aaKnown RBP3.65□□□□□ -1.83
LSM8YJR022W MDM12Q92328 271 aa3.65□□□□□ -1.83
LSM8YJR022W HBN1Q96VH4 193 aa3.65□□□□□ -1.83
LSM8YJR022W ATP4P05626 244 aa3.64□□□□□ -1.83
LSM8YJR022W PIF1P07271 859 aa3.64□□□□□ -1.83
LSM8YJR022W KIN2P13186 1147 aaKnown RBP3.64□□□□□ -1.83
LSM8YJR022W DBP5P20449 482 aaKnown RBP3.64□□□□□ -1.83
LSM8YJR022W EMC1P25574 760 aa3.64□□□□□ -1.83
LSM8YJR022W SYP1P25623 870 aaKnown RBP3.64□□□□□ -1.83
LSM8YJR022W YKL107WP34251 309 aa3.64□□□□□ -1.83
LSM8YJR022W CCC2P38995 1004 aa3.64□□□□□ -1.83
LSM8YJR022W CNN1P43618 361 aa3.64□□□□□ -1.83
LSM8YJR022W COG6P53959 839 aa3.64□□□□□ -1.83
LSM8YJR022W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
LSM8YJR022W UME1Q03010 460 aa3.64□□□□□ -1.83
LSM8YJR022W THI73Q07904 523 aa3.64□□□□□ -1.83
LSM8YJR022W SVS1Q12254 260 aa3.64□□□□□ -1.83
LSM8YJR022W SIN3P22579 1536 aa3.64□□□□□ -1.83
LSM8YJR022W TOP3P13099 656 aa3.63□□□□□ -1.83
LSM8YJR022W TRX2P22803 104 aaKnown RBP3.63□□□□□ -1.83
LSM8YJR022W APL1P27351 700 aa3.63□□□□□ -1.83
LSM8YJR022W YBR071WP38243 211 aa3.63□□□□□ -1.83
LSM8YJR022W IES5P40060 125 aa3.63□□□□□ -1.83
LSM8YJR022W MGS1P40151 587 aa3.63□□□□□ -1.83
LSM8YJR022W MPH1P40562 993 aa3.63□□□□□ -1.83
LSM8YJR022W YGL176CP46945 554 aa3.63□□□□□ -1.83
LSM8YJR022W GCV2P49095 1034 aa3.63□□□□□ -1.83
LSM8YJR022W TGL2P54857 326 aa3.63□□□□□ -1.83
LSM8YJR022W RAT1Q02792 1006 aaKnown RBP3.63□□□□□ -1.83
LSM8YJR022W SIZ1Q04195 904 aa3.63□□□□□ -1.83
LSM8YJR022W VMS1Q04311 632 aaKnown RBP3.63□□□□□ -1.83
LSM8YJR022W TMA64Q04600 565 aaKnown RBP3.63□□□□□ -1.83
LSM8YJR022W TY2B-LR1P0C2J3 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-FP0CX63 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-GR2P0CX64 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-CP25384 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-DR2Q03494 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY1B-DR1Q03855 1755 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-DR3Q07791 1770 aaKnown RBP3.63□□□□□ -1.83
LSM8YJR022W TY2B-OR1Q12113 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-DR1Q12472 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TY2B-OR2Q12501 1770 aa3.63□□□□□ -1.83
LSM8YJR022W TAF2P23255 1407 aa3.62□□□□□ -1.83
LSM8YJR022W ECM5Q03214 1411 aa3.62□□□□□ -1.83
LSM8YJR022W MDS3P53094 1487 aa3.62□□□□□ -1.83
LSM8YJR022W DPB3P27344 201 aa3.62□□□□□ -1.83
LSM8YJR022W SIP5P40210 489 aaKnown RBP3.62□□□□□ -1.83
LSM8YJR022W UBP6P43593 499 aaKnown RBP3.62□□□□□ -1.83
LSM8YJR022W GUS1P46655 708 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
LSM8YJR022W SDA1P53313 767 aaKnown RBP3.62□□□□□ -1.83
LSM8YJR022W ATG16Q03818 150 aa3.62□□□□□ -1.83
LSM8YJR022W SND1Q04007 877 aa3.62□□□□□ -1.83
LSM8YJR022W NOP12Q08208 459 aaKnown RBP3.62□□□□□ -1.83
LSM8YJR022W FAP7Q12055 197 aaPredicted RBP3.62□□□□□ -1.83
LSM8YJR022W TOM70P07213 617 aaKnown RBP3.61□□□□□ -1.83
LSM8YJR022W MSD1P15179 658 aaKnown RBP3.61□□□□□ -1.83
LSM8YJR022W EUG1P32474 517 aa3.61□□□□□ -1.83
LSM8YJR022W PET10P36139 283 aa3.61□□□□□ -1.83
LSM8YJR022W DSS1P39112 969 aa3.61□□□□□ -1.83
LSM8YJR022W PEA2P40091 420 aa3.61□□□□□ -1.83
LSM8YJR022W GPP1P41277 250 aaKnown RBP3.61□□□□□ -1.83
LSM8YJR022W YNL034WP53963 612 aa3.61□□□□□ -1.83
LSM8YJR022W YNL018CP53976 612 aa3.61□□□□□ -1.83
LSM8YJR022W BUD4P47136 1447 aa3.61□□□□□ -1.83
LSM8YJR022W RPA135P22138 1203 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms