RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C SCT1P32784 759 aa2.3□□□□□ -2.04
RTT101YJL047C PEX5P35056 612 aa2.3□□□□□ -2.04
RTT101YJL047C MCD4P36051 919 aa2.3□□□□□ -2.04
RTT101YJL047C YBR238CP38330 731 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C AXL2P38928 823 aa2.3□□□□□ -2.04
RTT101YJL047C CCT5P40413 562 aaKnown RBP2.3□□□□□ -2.04
RTT101YJL047C YIL165CP40446 119 aa2.3□□□□□ -2.04
RTT101YJL047C MPH1P40562 993 aa2.3□□□□□ -2.04
RTT101YJL047C CAF16P43569 289 aa2.3□□□□□ -2.04
RTT101YJL047C SPO71Q03868 1245 aa2.3□□□□□ -2.04
RTT101YJL047C BLS1Q06071 122 aa2.3□□□□□ -2.04
RTT101YJL047C RSC3Q06639 885 aa2.3□□□□□ -2.04
RTT101YJL047C PEX15Q08215 383 aa2.3□□□□□ -2.04
RTT101YJL047C YPL191CQ08930 360 aa2.3□□□□□ -2.04
RTT101YJL047C HSP42Q12329 375 aa2.3□□□□□ -2.04
RTT101YJL047C SCM3Q12334 223 aa2.3□□□□□ -2.04
RTT101YJL047C MRP7P12687 371 aa2.29□□□□□ -2.04
RTT101YJL047C PER1P25625 357 aa2.29□□□□□ -2.04
RTT101YJL047C AAR2P32357 355 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C AFG2P32794 780 aa2.29□□□□□ -2.04
RTT101YJL047C SAS3P34218 831 aa2.29□□□□□ -2.04
RTT101YJL047C YBL086CP38177 466 aa2.29□□□□□ -2.04
RTT101YJL047C YEL068CP39977 110 aa2.29□□□□□ -2.04
RTT101YJL047C SIT1P39980 628 aa2.29□□□□□ -2.04
RTT101YJL047C NOP16P40007 231 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C TOK1P40310 691 aa2.29□□□□□ -2.04
RTT101YJL047C SBE2P42223 864 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C RET2P43621 546 aa2.29□□□□□ -2.04
RTT101YJL047C CCT8P47079 568 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C ATP22P50273 684 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C RBG2P53295 368 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C CNM67P53865 581 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C MRPL19P53875 158 aa2.29□□□□□ -2.04
RTT101YJL047C YPR027CQ12079 277 aa2.29□□□□□ -2.04
RTT101YJL047C RPS21BQ3E754 87 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C SSM4P40318 1319 aa2.29□□□□□ -2.04
RTT101YJL047C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
RTT101YJL047C GUK1P15454 187 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C FUR1P18562 216 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C ATP12P22135 325 aa2.29□□□□□ -2.04
RTT101YJL047C RET1P22276 1149 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C NPP1P25353 742 aa2.29□□□□□ -2.04
RTT101YJL047C RPC53P25441 422 aa2.29□□□□□ -2.04
RTT101YJL047C RER1P25560 188 aa2.29□□□□□ -2.04
RTT101YJL047C PAT1P25644 796 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C HOG1P32485 435 aa2.29□□□□□ -2.04
RTT101YJL047C YKU70P32807 602 aa2.29□□□□□ -2.04
RTT101YJL047C PXA2P34230 853 aa2.29□□□□□ -2.04
RTT101YJL047C MDJ1P35191 511 aa2.29□□□□□ -2.04
RTT101YJL047C SHM2P37291 469 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C LRP1P38801 184 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C DUN1P39009 513 aa2.29□□□□□ -2.04
RTT101YJL047C SPC72P39723 622 aa2.29□□□□□ -2.04
RTT101YJL047C MXR1P40029 184 aa2.29□□□□□ -2.04
RTT101YJL047C VHR1P40522 640 aa2.29□□□□□ -2.04
RTT101YJL047C RRT6P53117 311 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C SLD3P53135 668 aa2.29□□□□□ -2.04
RTT101YJL047C YGR283CP53336 341 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C CUS1Q02554 436 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C SKY1Q03656 742 aa2.29□□□□□ -2.04
RTT101YJL047C HLR1Q04429 423 aa2.29□□□□□ -2.04
RTT101YJL047C YLR287CQ05881 355 aa2.29□□□□□ -2.04
RTT101YJL047C DUS3Q06053 668 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C EST2Q06163 884 aa2.29□□□□□ -2.04
RTT101YJL047C OMS1Q06668 471 aa2.29□□□□□ -2.04
RTT101YJL047C ISA1Q07821 250 aaPredicted RBP2.29□□□□□ -2.04
RTT101YJL047C GUP2Q08929 609 aa2.29□□□□□ -2.04
RTT101YJL047C DBP10Q12389 995 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C ENT1Q12518 454 aa2.29□□□□□ -2.04
RTT101YJL047C PGA3Q12746 312 aaKnown RBP2.29□□□□□ -2.04
RTT101YJL047C PGS1P25578 521 aa2.28□□□□□ -2.04
RTT101YJL047C CDC60P26637 1090 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C DID4P36108 232 aa2.28□□□□□ -2.04
RTT101YJL047C FAT1P38225 669 aa2.28□□□□□ -2.04
RTT101YJL047C NEM1P38757 446 aa2.28□□□□□ -2.04
RTT101YJL047C RIC1P40395 1056 aa2.28□□□□□ -2.04
RTT101YJL047C AIR1P40507 360 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C IRC6P43615 237 aa2.28□□□□□ -2.04
RTT101YJL047C SAE2P46946 345 aa2.28□□□□□ -2.04
RTT101YJL047C UBC9P50623 157 aaPredicted RBP2.28□□□□□ -2.04
RTT101YJL047C TEP1P53916 434 aa2.28□□□□□ -2.04
RTT101YJL047C SSL2Q00578 843 aa2.28□□□□□ -2.04
RTT101YJL047C TCB1Q12466 1186 aa2.28□□□□□ -2.04
RTT101YJL047C ILS1P09436 1072 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C ENA1P13587 1091 aa2.28□□□□□ -2.04
RTT101YJL047C NCP1P16603 691 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C CMK1P27466 446 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C MLS1P30952 554 aa2.28□□□□□ -2.04
RTT101YJL047C CCR4P31384 837 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C ORC2P32833 620 aa2.28□□□□□ -2.04
RTT101YJL047C YRO2P38079 344 aa2.28□□□□□ -2.04
RTT101YJL047C CCZ1P38273 704 aa2.28□□□□□ -2.04
RTT101YJL047C POP2P39008 433 aa2.28□□□□□ -2.04
RTT101YJL047C SSN3P39073 555 aa2.28□□□□□ -2.04
RTT101YJL047C IMA5P40884 581 aa2.28□□□□□ -2.04
RTT101YJL047C JJJ2P46997 583 aa2.28□□□□□ -2.04
RTT101YJL047C VPS53P47061 822 aa2.28□□□□□ -2.04
RTT101YJL047C CPR6P53691 371 aaKnown RBP2.28□□□□□ -2.04
RTT101YJL047C YNR040WP53736 256 aa2.28□□□□□ -2.04
RTT101YJL047C ENA2Q01896 1091 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms