RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C DON1Q05610 365 aa10.6□□□□□ -0.71
MET28YIR017C ECM7Q06200 448 aa10.6□□□□□ -0.71
MET28YIR017C SPO75Q07798 868 aa10.6□□□□□ -0.71
MET28YIR017C RPL17AP05740 184 aaKnown RBP10.59□□□□□ -0.71
MET28YIR017C APL1P27351 700 aa10.59□□□□□ -0.71
MET28YIR017C EBP2P36049 427 aaKnown RBP10.59□□□□□ -0.71
MET28YIR017C INP51P40559 946 aaKnown RBP10.59□□□□□ -0.71
MET28YIR017C LCB2P40970 561 aa10.59□□□□□ -0.71
MET28YIR017C SAD1P43589 448 aa10.59□□□□□ -0.71
MET28YIR017C RPL17BP46990 184 aaKnown RBP10.59□□□□□ -0.71
MET28YIR017C TIM8P57744 87 aa10.59□□□□□ -0.71
MET28YIR017C CDC53Q12018 815 aaKnown RBP10.59□□□□□ -0.71
MET28YIR017C LDB19Q12502 818 aa10.59□□□□□ -0.71
MET28YIR017C VMA1P17255 1071 aaKnown RBP10.58□□□□□ -0.72
MET28YIR017C FUB1P25659 250 aa10.58□□□□□ -0.72
MET28YIR017C RPC25P35718 212 aa10.58□□□□□ -0.72
MET28YIR017C MPE1P35728 441 aaKnown RBP10.58□□□□□ -0.72
MET28YIR017C MIP6P38760 659 aaKnown RBP10.58□□□□□ -0.72
MET28YIR017C UBP5P39944 805 aa10.58□□□□□ -0.72
MET28YIR017C NPP2P39997 493 aa10.58□□□□□ -0.72
MET28YIR017C MNP1P53163 194 aaPredicted RBP10.58□□□□□ -0.72
MET28YIR017C SSB1P11484 613 aaKnown RBP10.57□□□□□ -0.72
MET28YIR017C MRPL32P25348 183 aa10.57□□□□□ -0.72
MET28YIR017C WHI3P34761 661 aaKnown RBP10.57□□□□□ -0.72
MET28YIR017C MRX3P38172 270 aa10.57□□□□□ -0.72
MET28YIR017C MMS4P38257 691 aa10.57□□□□□ -0.72
MET28YIR017C EFM2P38347 419 aa10.57□□□□□ -0.72
MET28YIR017C FIR1P40020 876 aa10.57□□□□□ -0.72
MET28YIR017C SSB2P40150 613 aaKnown RBP10.57□□□□□ -0.72
MET28YIR017C HSH155P49955 971 aaKnown RBP10.57□□□□□ -0.72
MET28YIR017C ORC5P50874 479 aa10.57□□□□□ -0.72
MET28YIR017C ENV11P53246 860 aa10.57□□□□□ -0.72
MET28YIR017C MUK1Q02866 612 aa10.57□□□□□ -0.72
MET28YIR017C TRS130Q03660 1102 aa10.57□□□□□ -0.72
MET28YIR017C POT1P27796 417 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
MET28YIR017C PIN4P34217 668 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
MET28YIR017C DRE2P36152 348 aa10.56□□□□□ -0.72
MET28YIR017C TVP23P38962 199 aa10.56□□□□□ -0.72
MET28YIR017C ASN1P49089 572 aaKnown RBP10.56□□□□□ -0.72
MET28YIR017C VPS75P53853 264 aa10.56□□□□□ -0.72
MET28YIR017C YNL134CP53912 376 aaKnown RBP10.56□□□□□ -0.72
MET28YIR017C SHS1Q07657 551 aa10.56□□□□□ -0.72
MET28YIR017C FAL1Q12099 399 aaKnown RBP10.56□□□□□ -0.72
MET28YIR017C PCD1Q12524 340 aa10.56□□□□□ -0.72
MET28YIR017C ADE2P21264 571 aaKnown RBP10.55□□□□□ -0.72
MET28YIR017C SEC65P29478 273 aa10.55□□□□□ -0.72
MET28YIR017C FIG4P42837 879 aa10.55□□□□□ -0.72
MET28YIR017C LAM5P43560 674 aa10.55□□□□□ -0.72
MET28YIR017C ALT2P52892 507 aa10.55□□□□□ -0.72
MET28YIR017C DOT1Q04089 582 aaKnown RBP10.55□□□□□ -0.72
MET28YIR017C PLP2Q12017 286 aa10.55□□□□□ -0.72
MET28YIR017C RPS6AP0CX37 236 aaKnown RBP10.54□□□□□ -0.72
MET28YIR017C RPS6BP0CX38 236 aaPredicted RBP10.54□□□□□ -0.72
MET28YIR017C NAT1P12945 854 aaKnown RBP10.54□□□□□ -0.72
MET28YIR017C SPO11P23179 398 aa10.54□□□□□ -0.72
MET28YIR017C GRS1P38088 690 aaKnown RBP10.54□□□□□ -0.72
MET28YIR017C FTR1P40088 404 aa10.54□□□□□ -0.72
MET28YIR017C GCV2P49095 1034 aa10.54□□□□□ -0.72
MET28YIR017C YNL115CP53925 644 aa10.54□□□□□ -0.72
MET28YIR017C YLR287CQ05881 355 aa10.54□□□□□ -0.72
MET28YIR017C ZPS1Q12512 249 aa10.54□□□□□ -0.72
MET28YIR017C PHO13P19881 312 aa10.53□□□□□ -0.72
MET28YIR017C MAC1P35192 417 aa10.53□□□□□ -0.72
MET28YIR017C YKL023WP36103 277 aaKnown RBP10.53□□□□□ -0.72
MET28YIR017C SHM1P37292 490 aaPredicted RBP10.53□□□□□ -0.72
MET28YIR017C YAP1801P38856 637 aa10.53□□□□□ -0.72
MET28YIR017C SPO74P45819 413 aa10.53□□□□□ -0.72
MET28YIR017C SMC3P47037 1230 aa10.53□□□□□ -0.72
MET28YIR017C ISM1P48526 1002 aa10.53□□□□□ -0.72
MET28YIR017C YLR297WQ05899 129 aa10.53□□□□□ -0.72
MET28YIR017C CWC2Q12046 339 aaPredicted RBP10.53□□□□□ -0.72
MET28YIR017C GLN3P18494 730 aa10.52□□□□□ -0.73
MET28YIR017C MCM2P29469 868 aa10.52□□□□□ -0.73
MET28YIR017C NIP100P33420 868 aa10.52□□□□□ -0.73
MET28YIR017C TRM2P33753 639 aa10.52□□□□□ -0.73
MET28YIR017C BRL1P38770 471 aa10.52□□□□□ -0.73
MET28YIR017C TBF1Q02457 562 aa10.52□□□□□ -0.73
MET28YIR017C CWC21Q03375 135 aaKnown RBP10.52□□□□□ -0.73
MET28YIR017C SGT2Q12118 346 aaKnown RBP10.52□□□□□ -0.73
MET28YIR017C TOM70P07213 617 aaKnown RBP10.51□□□□□ -0.73
MET28YIR017C SWI3P32591 825 aa10.51□□□□□ -0.73
MET28YIR017C RPA49Q01080 415 aaPredicted RBP10.51□□□□□ -0.73
MET28YIR017C CEF1Q03654 590 aaPredicted RBP10.51□□□□□ -0.73
MET28YIR017C YPR078CQ06813 372 aa10.51□□□□□ -0.73
MET28YIR017C SLX4Q12098 748 aa10.51□□□□□ -0.73
MET28YIR017C RRP6Q12149 733 aaKnown RBP10.51□□□□□ -0.73
MET28YIR017C ADE4P04046 510 aaKnown RBP10.5□□□□□ -0.73
MET28YIR017C PRR1P28708 518 aa10.5□□□□□ -0.73
MET28YIR017C SPC110P32380 944 aa10.5□□□□□ -0.73
MET28YIR017C RPT1P33299 467 aaKnown RBP10.5□□□□□ -0.73
MET28YIR017C XRS2P33301 854 aa10.5□□□□□ -0.73
MET28YIR017C POA1P38218 177 aa10.5□□□□□ -0.73
MET28YIR017C UBX7P38349 436 aa10.5□□□□□ -0.73
MET28YIR017C YHL026CP38740 315 aa10.5□□□□□ -0.73
MET28YIR017C FOL2P51601 243 aaKnown RBP10.5□□□□□ -0.73
MET28YIR017C YGR035CP53222 116 aa10.5□□□□□ -0.73
MET28YIR017C ALG11P53954 548 aaKnown RBP10.5□□□□□ -0.73
MET28YIR017C RGA2Q06407 1009 aa10.5□□□□□ -0.73
MET28YIR017C MAG2Q06436 670 aaKnown RBP10.5□□□□□ -0.73
MET28YIR017C CSR1Q06705 408 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 532.7 ms