RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W TPO2P53283 614 aa3.33□□□□□ -1.88
MSL1YIR009W RNT1Q02555 471 aa3.33□□□□□ -1.88
MSL1YIR009W TMN2Q04562 672 aa3.33□□□□□ -1.88
MSL1YIR009W PEX19Q07418 342 aa3.33□□□□□ -1.88
MSL1YIR009W MCH5Q08777 521 aa3.33□□□□□ -1.88
MSL1YIR009W PPR1P07272 904 aaPredicted RBP3.32□□□□□ -1.88
MSL1YIR009W ALG7P07286 448 aa3.32□□□□□ -1.88
MSL1YIR009W TUB3P09734 445 aaKnown RBP3.32□□□□□ -1.88
MSL1YIR009W PRP9P19736 530 aaKnown RBP3.32□□□□□ -1.88
MSL1YIR009W CTF13P35203 478 aa3.32□□□□□ -1.88
MSL1YIR009W YBR184WP38299 523 aa3.32□□□□□ -1.88
MSL1YIR009W YIL108WP40483 696 aaKnown RBP3.32□□□□□ -1.88
MSL1YIR009W HDA1P53973 706 aa3.32□□□□□ -1.88
MSL1YIR009W YKR011CQ02209 353 aa3.32□□□□□ -1.88
MSL1YIR009W VPS30Q02948 557 aa3.32□□□□□ -1.88
MSL1YIR009W LCD1Q04377 747 aa3.32□□□□□ -1.88
MSL1YIR009W TDA5Q06417 326 aaKnown RBP3.32□□□□□ -1.88
MSL1YIR009W ACF2Q12168 779 aa3.32□□□□□ -1.88
MSL1YIR009W AIM44Q99299 758 aa3.32□□□□□ -1.88
MSL1YIR009W RFA1P22336 621 aaKnown RBP3.31□□□□□ -1.88
MSL1YIR009W TYE7P33122 291 aaPredicted RBP3.31□□□□□ -1.88
MSL1YIR009W QRI1P43123 477 aaKnown RBP3.31□□□□□ -1.88
MSL1YIR009W SNU71P53207 620 aaKnown RBP3.31□□□□□ -1.88
MSL1YIR009W MUK1Q02866 612 aa3.31□□□□□ -1.88
MSL1YIR009W YML122CQ03207 126 aa3.31□□□□□ -1.88
MSL1YIR009W YMR206WQ03695 313 aa3.31□□□□□ -1.88
MSL1YIR009W URA1P28272 314 aaPredicted RBP3.3□□□□□ -1.88
MSL1YIR009W REC104P33323 182 aa3.3□□□□□ -1.88
MSL1YIR009W CEP3P40969 608 aa3.3□□□□□ -1.88
MSL1YIR009W FMP25Q08023 583 aa3.3□□□□□ -1.88
MSL1YIR009W IRC10Q08118 586 aa3.3□□□□□ -1.88
MSL1YIR009W TRM11Q12463 433 aa3.3□□□□□ -1.88
MSL1YIR009W PRP4P20053 465 aaKnown RBP3.29□□□□□ -1.88
MSL1YIR009W ALR2P43553 858 aa3.29□□□□□ -1.88
MSL1YIR009W UTP8P53276 713 aaKnown RBP3.29□□□□□ -1.88
MSL1YIR009W TIM44Q01852 431 aa3.29□□□□□ -1.88
MSL1YIR009W FRE5Q08908 694 aa3.29□□□□□ -1.88
MSL1YIR009W YPR071WQ12346 211 aa3.29□□□□□ -1.88
MSL1YIR009W SWM1Q12379 170 aa3.29□□□□□ -1.88
MSL1YIR009W CDC11P32458 415 aa3.28□□□□□ -1.88
MSL1YIR009W MTH1P35198 433 aa3.28□□□□□ -1.88
MSL1YIR009W YBR284WP38150 797 aa3.28□□□□□ -1.88
MSL1YIR009W YHR078WP38799 552 aa3.28□□□□□ -1.88
MSL1YIR009W ELO3P40319 345 aa3.28□□□□□ -1.88
MSL1YIR009W STU2P46675 888 aa3.28□□□□□ -1.88
MSL1YIR009W MRPS35P53292 345 aa3.28□□□□□ -1.88
MSL1YIR009W MET3P08536 511 aa3.27□□□□□ -1.89
MSL1YIR009W MPH2P0CD99 609 aa3.27□□□□□ -1.89
MSL1YIR009W GRX1P25373 110 aaKnown RBP3.27□□□□□ -1.89
MSL1YIR009W RPL8BP29453 256 aaKnown RBP3.27□□□□□ -1.89
MSL1YIR009W PET10P36139 283 aa3.27□□□□□ -1.89
MSL1YIR009W PPS1P38148 807 aa3.27□□□□□ -1.89
MSL1YIR009W RPP1P38786 293 aa3.27□□□□□ -1.89
MSL1YIR009W GND2P53319 492 aa3.27□□□□□ -1.89
MSL1YIR009W ASI2P53895 289 aa3.27□□□□□ -1.89
MSL1YIR009W DLT1Q04216 342 aa3.27□□□□□ -1.89
MSL1YIR009W ADY4Q05955 493 aa3.27□□□□□ -1.89
MSL1YIR009W ENV7Q12003 364 aa3.27□□□□□ -1.89
MSL1YIR009W SSF2Q12153 453 aaPredicted RBP3.27□□□□□ -1.89
MSL1YIR009W HBN1Q96VH4 193 aa3.27□□□□□ -1.89
MSL1YIR009W RPS9AO13516 197 aaKnown RBP3.26□□□□□ -1.89
MSL1YIR009W MSD1P15179 658 aaKnown RBP3.26□□□□□ -1.89
MSL1YIR009W SCT1P32784 759 aa3.26□□□□□ -1.89
MSL1YIR009W PAM1P37304 830 aaKnown RBP3.26□□□□□ -1.89
MSL1YIR009W SDS3P40505 327 aa3.26□□□□□ -1.89
MSL1YIR009W VHR1P40522 640 aa3.26□□□□□ -1.89
MSL1YIR009W FKH2P41813 862 aa3.26□□□□□ -1.89
MSL1YIR009W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
MSL1YIR009W UBX5Q06682 500 aa3.26□□□□□ -1.89
MSL1YIR009W CAF20P12962 161 aaKnown RBP3.25□□□□□ -1.89
MSL1YIR009W SPC42P36094 363 aa3.25□□□□□ -1.89
MSL1YIR009W ATF1P40353 525 aa3.25□□□□□ -1.89
MSL1YIR009W MUP1P50276 574 aa3.25□□□□□ -1.89
MSL1YIR009W PUS2P53167 370 aa3.25□□□□□ -1.89
MSL1YIR009W ERP6P53198 216 aa3.25□□□□□ -1.89
MSL1YIR009W DUS1P53759 423 aaKnown RBP3.25□□□□□ -1.89
MSL1YIR009W ORC1P54784 914 aaPredicted RBP3.25□□□□□ -1.89
MSL1YIR009W NAN1Q02931 896 aaKnown RBP3.25□□□□□ -1.89
MSL1YIR009W EAF1Q06337 982 aa3.25□□□□□ -1.89
MSL1YIR009W HAL9Q12180 1030 aa3.25□□□□□ -1.89
MSL1YIR009W TOP3P13099 656 aa3.24□□□□□ -1.89
MSL1YIR009W CYS3P31373 394 aaKnown RBP3.24□□□□□ -1.89
MSL1YIR009W YBR053CP38235 358 aa3.24□□□□□ -1.89
MSL1YIR009W YHL017WP38745 532 aa3.24□□□□□ -1.89
MSL1YIR009W DAS1P47005 663 aa3.24□□□□□ -1.89
MSL1YIR009W HBT1Q07653 1046 aaKnown RBP3.24□□□□□ -1.89
MSL1YIR009W SPO75Q07798 868 aa3.24□□□□□ -1.89
MSL1YIR009W WRS1Q12109 432 aaKnown RBP3.24□□□□□ -1.89
MSL1YIR009W NOG2P53742 486 aaKnown RBP3.23□□□□□ -1.89
MSL1YIR009W MUS81Q04149 632 aaPredicted RBP3.23□□□□□ -1.89
MSL1YIR009W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
MSL1YIR009W DAL7P21826 554 aa3.22□□□□□ -1.89
MSL1YIR009W ARE1P25628 610 aa3.22□□□□□ -1.89
MSL1YIR009W PZF1P39933 429 aa3.22□□□□□ -1.89
MSL1YIR009W UBP6P43593 499 aaKnown RBP3.22□□□□□ -1.89
MSL1YIR009W YJL163CP46996 555 aa3.22□□□□□ -1.89
MSL1YIR009W NIT3P49954 291 aa3.22□□□□□ -1.89
MSL1YIR009W AMA1P50082 593 aa3.22□□□□□ -1.89
MSL1YIR009W PKH1Q03407 766 aa3.22□□□□□ -1.89
MSL1YIR009W MRH1Q12117 320 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms