RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM2	YIL138C	GND2	P53319	492 aa		4.1	□□□□□ -1.75
TPM2	YIL138C	CWC24	P53769	259 aa		4.1	□□□□□ -1.75
TPM2	YIL138C	SSL1	Q04673	461 aa	Predicted RBP	4.1	□□□□□ -1.75
TPM2	YIL138C	FRE5	Q08908	694 aa		4.1	□□□□□ -1.75
TPM2	YIL138C	SWM1	Q12379	170 aa		4.1	□□□□□ -1.75
TPM2	YIL138C	NPP1	P25353	742 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	AAR2	P32357	355 aa	Predicted RBP	4.09	□□□□□ -1.75
TPM2	YIL138C	YHL017W	P38745	532 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	CTF8	P38877	133 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	MAD1	P40957	749 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	DLT1	Q04216	342 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	PIN2	Q12057	282 aa		4.09	□□□□□ -1.75
TPM2	YIL138C	AFR1	P33304	620 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	PBY1	P38254	753 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	ELO3	P40319	345 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	SDS3	P40505	327 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	CCM1	P48237	864 aa	Predicted RBP	4.08	□□□□□ -1.76
TPM2	YIL138C	SVF1	Q05515	481 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	OPI10	Q08202	246 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	NDJ1	Q12366	352 aa		4.08	□□□□□ -1.76
TPM2	YIL138C	RFA1	P22336	621 aa	Known RBP	4.07	□□□□□ -1.76
TPM2	YIL138C	TYE7	P33122	291 aa	Predicted RBP	4.07	□□□□□ -1.76
TPM2	YIL138C	YRO2	P38079	344 aa		4.07	□□□□□ -1.76
TPM2	YIL138C	YIL108W	P40483	696 aa	Known RBP	4.07	□□□□□ -1.76
TPM2	YIL138C	SNM1	P40993	198 aa		4.07	□□□□□ -1.76
TPM2	YIL138C	TUB3	P09734	445 aa	Known RBP	4.06	□□□□□ -1.76
TPM2	YIL138C	CAF20	P12962	161 aa	Known RBP	4.06	□□□□□ -1.76
TPM2	YIL138C	PPS1	P38148	807 aa		4.06	□□□□□ -1.76
TPM2	YIL138C	YKR011C	Q02209	353 aa		4.06	□□□□□ -1.76
TPM2	YIL138C	ADY4	Q05955	493 aa		4.06	□□□□□ -1.76
TPM2	YIL138C	IRR1	P40541	1150 aa		4.05	□□□□□ -1.76
TPM2	YIL138C	LCD1	Q04377	747 aa		4.05	□□□□□ -1.76
TPM2	YIL138C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
TPM2	YIL138C	PRP9	P19736	530 aa	Known RBP	4.04	□□□□□ -1.76
TPM2	YIL138C	RPD3	P32561	433 aa		4.04	□□□□□ -1.76
TPM2	YIL138C	PEX2	P32800	271 aa		4.04	□□□□□ -1.76
TPM2	YIL138C	YHR078W	P38799	552 aa		4.04	□□□□□ -1.76
TPM2	YIL138C	HDA1	P53973	706 aa		4.04	□□□□□ -1.76
TPM2	YIL138C	BUL2	Q03758	920 aa	Known RBP	4.04	□□□□□ -1.76
TPM2	YIL138C	GFA1	P14742	717 aa	Known RBP	4.03	□□□□□ -1.76
TPM2	YIL138C	URA1	P28272	314 aa	Predicted RBP	4.03	□□□□□ -1.76
TPM2	YIL138C	YKL069W	P36088	180 aa		4.03	□□□□□ -1.76
TPM2	YIL138C	RPP1	P38786	293 aa		4.03	□□□□□ -1.76
TPM2	YIL138C	CEP3	P40969	608 aa		4.03	□□□□□ -1.76
TPM2	YIL138C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
TPM2	YIL138C	MRH1	Q12117	320 aa	Predicted RBP	4.03	□□□□□ -1.76
TPM2	YIL138C	RPS9A	O13516	197 aa	Known RBP	4.02	□□□□□ -1.77
TPM2	YIL138C	NGG1	P32494	702 aa		4.02	□□□□□ -1.77
TPM2	YIL138C	REC104	P33323	182 aa		4.02	□□□□□ -1.77
TPM2	YIL138C	FKH2	P41813	862 aa		4.02	□□□□□ -1.77
TPM2	YIL138C	AMA1	P50082	593 aa		4.02	□□□□□ -1.77
TPM2	YIL138C	MUP1	P50276	574 aa		4.02	□□□□□ -1.77
TPM2	YIL138C	PRI2	P20457	528 aa		4.01	□□□□□ -1.77
TPM2	YIL138C	TOK1	P40310	691 aa		4.01	□□□□□ -1.77
TPM2	YIL138C	RIA1	P53893	1110 aa		4.01	□□□□□ -1.77
TPM2	YIL138C	ASI2	P53895	289 aa		4.01	□□□□□ -1.77
TPM2	YIL138C	CDC43	P18898	376 aa		4	□□□□□ -1.77
TPM2	YIL138C	ILV6	P25605	309 aa	Known RBP	4	□□□□□ -1.77
TPM2	YIL138C	CDC11	P32458	415 aa		4	□□□□□ -1.77
TPM2	YIL138C	PUS2	P53167	370 aa		4	□□□□□ -1.77
TPM2	YIL138C	PKH1	Q03407	766 aa		4	□□□□□ -1.77
TPM2	YIL138C	CRR1	Q05790	422 aa		4	□□□□□ -1.77
TPM2	YIL138C	MPH2	P0CD99	609 aa		3.99	□□□□□ -1.77
TPM2	YIL138C	HCA4	P20448	770 aa	Known RBP	3.99	□□□□□ -1.77
TPM2	YIL138C	HBS1	P32769	611 aa	Known RBP	3.99	□□□□□ -1.77
TPM2	YIL138C	YBR053C	P38235	358 aa		3.99	□□□□□ -1.77
TPM2	YIL138C	VHR1	P40522	640 aa		3.99	□□□□□ -1.77
TPM2	YIL138C	YJL163C	P46996	555 aa		3.99	□□□□□ -1.77
TPM2	YIL138C	JIP5	Q06214	492 aa	Predicted RBP	3.99	□□□□□ -1.77
TPM2	YIL138C	PRP4	P20053	465 aa	Known RBP	3.98	□□□□□ -1.77
TPM2	YIL138C	TDP1	P38319	544 aa		3.98	□□□□□ -1.77
TPM2	YIL138C	PCL5	P38794	229 aa		3.98	□□□□□ -1.77
TPM2	YIL138C	SPF1	P39986	1215 aa	Known RBP	3.98	□□□□□ -1.77
TPM2	YIL138C	COQ11	Q05892	277 aa		3.98	□□□□□ -1.77
TPM2	YIL138C	SUT2	Q12286	268 aa		3.98	□□□□□ -1.77
TPM2	YIL138C	STE5	P32917	917 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	PPZ2	P33329	710 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	ERT1	P38140	529 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	PZF1	P39933	429 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	YIR042C	P40586	236 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	TAH11	P47112	604 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	VPS73	P53142	486 aa	Known RBP	3.97	□□□□□ -1.77
TPM2	YIL138C	IMO32	P53219	342 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	MRPS35	P53292	345 aa		3.97	□□□□□ -1.77
TPM2	YIL138C	NOG2	P53742	486 aa	Known RBP	3.97	□□□□□ -1.77
TPM2	YIL138C	TDA5	Q06417	326 aa	Known RBP	3.97	□□□□□ -1.77
TPM2	YIL138C	TUB1	P09733	447 aa	Known RBP	3.96	□□□□□ -1.78
TPM2	YIL138C	YIL166C	P40445	542 aa		3.96	□□□□□ -1.78
TPM2	YIL138C	UTP8	P53276	713 aa	Known RBP	3.96	□□□□□ -1.78
TPM2	YIL138C	DUS1	P53759	423 aa	Known RBP	3.96	□□□□□ -1.78
TPM2	YIL138C	BNR1	P40450	1375 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	LAT1	P12695	482 aa	Known RBP	3.95	□□□□□ -1.78
TPM2	YIL138C	KIN3	P22209	435 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	CYS3	P31373	394 aa	Known RBP	3.95	□□□□□ -1.78
TPM2	YIL138C	YBR184W	P38299	523 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	PFD1	P46988	109 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	NIT3	P49954	291 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	HSV2	P50079	448 aa	Predicted RBP	3.95	□□□□□ -1.78
TPM2	YIL138C	NRG1	Q03125	231 aa		3.95	□□□□□ -1.78
TPM2	YIL138C	SGO1	Q08490	590 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms