RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
SEC28YIL076W ENB1Q08299 606 aa6.09□□□□□ -1.43
SEC28YIL076W TOP3P13099 656 aa6.08□□□□□ -1.44
SEC28YIL076W HRR25P29295 494 aaKnown RBP6.08□□□□□ -1.44
SEC28YIL076W YIL108WP40483 696 aaKnown RBP6.08□□□□□ -1.44
SEC28YIL076W CEP3P40969 608 aa6.08□□□□□ -1.44
SEC28YIL076W URN1Q06525 465 aaKnown RBP6.08□□□□□ -1.44
SEC28YIL076W CIT1P00890 479 aa6.07□□□□□ -1.44
SEC28YIL076W URA1P28272 314 aaPredicted RBP6.07□□□□□ -1.44
SEC28YIL076W AIM39Q08223 395 aa6.07□□□□□ -1.44
SEC28YIL076W GUP2Q08929 609 aa6.07□□□□□ -1.44
SEC28YIL076W FBP1P09201 348 aa6.06□□□□□ -1.44
SEC28YIL076W SCT1P32784 759 aa6.06□□□□□ -1.44
SEC28YIL076W TYE7P33122 291 aaPredicted RBP6.06□□□□□ -1.44
SEC28YIL076W YHR020WP38708 688 aaKnown RBP6.06□□□□□ -1.44
SEC28YIL076W YJL049WP47048 450 aa6.06□□□□□ -1.44
SEC28YIL076W SLI1P53304 468 aa6.06□□□□□ -1.44
SEC28YIL076W HDA1P53973 706 aa6.06□□□□□ -1.44
SEC28YIL076W YKR011CQ02209 353 aa6.06□□□□□ -1.44
SEC28YIL076W ENV7Q12003 364 aa6.06□□□□□ -1.44
SEC28YIL076W CHS7P38843 316 aa6.05□□□□□ -1.44
SEC28YIL076W BUL1P48524 976 aa6.05□□□□□ -1.44
SEC28YIL076W SLU7Q02775 382 aaKnown RBP6.05□□□□□ -1.44
SEC28YIL076W TAF8Q03750 510 aa6.05□□□□□ -1.44
SEC28YIL076W YDL124WQ07551 312 aaKnown RBP6.05□□□□□ -1.44
SEC28YIL076W RPS9AO13516 197 aaKnown RBP6.04□□□□□ -1.44
SEC28YIL076W MPH2P0CD99 609 aa6.04□□□□□ -1.44
SEC28YIL076W SDP1P40479 209 aa6.04□□□□□ -1.44
SEC28YIL076W HUL5P53119 910 aa6.04□□□□□ -1.44
SEC28YIL076W FLC1Q08967 793 aa6.04□□□□□ -1.44
SEC28YIL076W SEC21P32074 935 aaKnown RBP6.03□□□□□ -1.44
SEC28YIL076W HUL4P40985 892 aa6.03□□□□□ -1.44
SEC28YIL076W UBP6P43593 499 aaKnown RBP6.03□□□□□ -1.44
SEC28YIL076W EFT1P32324 842 aaKnown RBP6.02□□□□□ -1.45
SEC28YIL076W CTF8P38877 133 aa6.02□□□□□ -1.45
SEC28YIL076W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SEC28YIL076W TOM70P07213 617 aaKnown RBP6.01□□□□□ -1.45
SEC28YIL076W BET3P36149 193 aa6.01□□□□□ -1.45
SEC28YIL076W NIT3P49954 291 aa6.01□□□□□ -1.45
SEC28YIL076W PUS2P53167 370 aa6.01□□□□□ -1.45
SEC28YIL076W BDF2Q07442 638 aa6.01□□□□□ -1.45
SEC28YIL076W CTF4Q01454 927 aa6□□□□□ -1.45
SEC28YIL076W PEX19Q07418 342 aa6□□□□□ -1.45
SEC28YIL076W YLR040CQ07988 224 aa6□□□□□ -1.45
SEC28YIL076W RSP5P39940 809 aaKnown RBP5.99□□□□□ -1.45
SEC28YIL076W GYP8P43570 497 aa5.99□□□□□ -1.45
SEC28YIL076W RTA1P53047 317 aa5.99□□□□□ -1.45
SEC28YIL076W TRP4P07285 380 aaPredicted RBP5.98□□□□□ -1.45
SEC28YIL076W TUB3P09734 445 aaKnown RBP5.98□□□□□ -1.45
SEC28YIL076W NOG2P53742 486 aaKnown RBP5.98□□□□□ -1.45
SEC28YIL076W CDC53Q12018 815 aaKnown RBP5.98□□□□□ -1.45
SEC28YIL076W HAL9Q12180 1030 aa5.98□□□□□ -1.45
SEC28YIL076W CAN1P04817 590 aa5.97□□□□□ -1.45
SEC28YIL076W DAL7P21826 554 aa5.97□□□□□ -1.45
SEC28YIL076W CYS3P31373 394 aaKnown RBP5.97□□□□□ -1.45
SEC28YIL076W EMC3P36039 253 aa5.97□□□□□ -1.45
SEC28YIL076W YHR078WP38799 552 aa5.97□□□□□ -1.45
SEC28YIL076W NNF1P47149 201 aa5.97□□□□□ -1.45
SEC28YIL076W YGR283CP53336 341 aaPredicted RBP5.97□□□□□ -1.45
SEC28YIL076W ERG5P54781 538 aa5.97□□□□□ -1.45
SEC28YIL076W NSE3Q05541 303 aa5.97□□□□□ -1.45
SEC28YIL076W SWM1Q12379 170 aa5.97□□□□□ -1.45
SEC28YIL076W GAL11P19659 1081 aa5.96□□□□□ -1.46
SEC28YIL076W SUL1P38359 859 aa5.96□□□□□ -1.46
SEC28YIL076W TAD1P53065 400 aa5.96□□□□□ -1.46
SEC28YIL076W DUS1P53759 423 aaKnown RBP5.96□□□□□ -1.46
SEC28YIL076W YOR022CQ12204 715 aa5.96□□□□□ -1.46
SEC28YIL076W TRM13Q12383 476 aa5.96□□□□□ -1.46
SEC28YIL076W ERG4P25340 473 aa5.95□□□□□ -1.46
SEC28YIL076W YCL002CP25565 263 aa5.95□□□□□ -1.46
SEC28YIL076W CTF13P35203 478 aa5.95□□□□□ -1.46
SEC28YIL076W KTR4P38131 464 aa5.95□□□□□ -1.46
SEC28YIL076W GGA2P38817 585 aaKnown RBP5.95□□□□□ -1.46
SEC28YIL076W ALG2P43636 503 aa5.95□□□□□ -1.46
SEC28YIL076W LRS4Q04087 347 aaKnown RBP5.95□□□□□ -1.46
SEC28YIL076W YOL073CQ08232 322 aa5.95□□□□□ -1.46
SEC28YIL076W STI1P15705 589 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
SEC28YIL076W PRP4P20053 465 aaKnown RBP5.94□□□□□ -1.46
SEC28YIL076W DAM1P53267 343 aa5.94□□□□□ -1.46
SEC28YIL076W TRM11Q12463 433 aa5.94□□□□□ -1.46
SEC28YIL076W PRC1P00729 532 aa5.93□□□□□ -1.46
SEC28YIL076W VHR1P40522 640 aa5.93□□□□□ -1.46
SEC28YIL076W PHR1P05066 565 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
SEC28YIL076W RAD53P22216 821 aa5.92□□□□□ -1.46
SEC28YIL076W MOH1P38191 138 aa5.92□□□□□ -1.46
SEC28YIL076W ASI2P53895 289 aa5.92□□□□□ -1.46
SEC28YIL076W RNT1Q02555 471 aa5.92□□□□□ -1.46
SEC28YIL076W YOL098CQ12496 1037 aa5.92□□□□□ -1.46
SEC28YIL076W SAP190P36123 1033 aa5.91□□□□□ -1.46
SEC28YIL076W RPP1P38786 293 aa5.91□□□□□ -1.46
SEC28YIL076W MRPS35P53292 345 aa5.91□□□□□ -1.46
SEC28YIL076W REH1Q06709 432 aa5.91□□□□□ -1.46
SEC28YIL076W MET7Q08645 548 aa5.91□□□□□ -1.46
SEC28YIL076W OAR1P35731 278 aa5.9□□□□□ -1.46
SEC28YIL076W FKH2P41813 862 aa5.9□□□□□ -1.46
SEC28YIL076W SSY5P47002 699 aa5.9□□□□□ -1.46
SEC28YIL076W PKH1Q03407 766 aa5.9□□□□□ -1.46
SEC28YIL076W YDR514CQ04408 483 aa5.9□□□□□ -1.46
SEC28YIL076W PPM2Q08282 695 aa5.9□□□□□ -1.46
SEC28YIL076W ALG7P07286 448 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms