RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W RER2P35196 286 aa2.42□□□□□ -2.02
RTT107YHR154W SUM1P46676 1062 aa2.42□□□□□ -2.02
RTT107YHR154W PFD1P46988 109 aa2.42□□□□□ -2.02
RTT107YHR154W HEH2Q03281 663 aa2.42□□□□□ -2.02
RTT107YHR154W PMT7Q06644 662 aa2.42□□□□□ -2.02
RTT107YHR154W GUD1Q07729 489 aa2.42□□□□□ -2.02
RTT107YHR154W RPO41P13433 1351 aaKnown RBP2.41□□□□□ -2.02
RTT107YHR154W AEP2P22136 580 aa2.41□□□□□ -2.02
RTT107YHR154W KCC4P25389 1037 aa2.41□□□□□ -2.02
RTT107YHR154W DBF20P32328 564 aa2.41□□□□□ -2.02
RTT107YHR154W ESL2P36168 1195 aa2.41□□□□□ -2.02
RTT107YHR154W ABZ1P37254 787 aaPredicted RBP2.41□□□□□ -2.02
RTT107YHR154W YRO2P38079 344 aa2.41□□□□□ -2.02
RTT107YHR154W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
RTT107YHR154W VPS30Q02948 557 aa2.41□□□□□ -2.02
RTT107YHR154W HDA2Q06629 674 aa2.41□□□□□ -2.02
RTT107YHR154W NEW1Q08972 1196 aaKnown RBP2.41□□□□□ -2.02
RTT107YHR154W HBN1Q96VH4 193 aa2.41□□□□□ -2.02
RTT107YHR154W SSM4P40318 1319 aa2.41□□□□□ -2.02
RTT107YHR154W MSH3P25336 1018 aa2.41□□□□□ -2.02
RTT107YHR154W KAP122P32767 1081 aa2.41□□□□□ -2.02
RTT107YHR154W GIP1P38229 639 aa2.41□□□□□ -2.02
RTT107YHR154W VTC2P43585 828 aa2.41□□□□□ -2.02
RTT107YHR154W YJR096WP47137 282 aa2.41□□□□□ -2.02
RTT107YHR154W GPG1P53130 126 aa2.41□□□□□ -2.02
RTT107YHR154W RIX7Q07844 837 aaKnown RBP2.41□□□□□ -2.02
RTT107YHR154W GRC3Q07845 632 aa2.41□□□□□ -2.02
RTT107YHR154W RMP1Q12530 201 aa2.41□□□□□ -2.02
RTT107YHR154W GSC2P40989 1895 aa2.41□□□□□ -2.02
RTT107YHR154W LEU2P04173 364 aaPredicted RBP2.4□□□□□ -2.02
RTT107YHR154W RPS0AP32905 252 aaKnown RBP2.4□□□□□ -2.02
RTT107YHR154W HSP78P33416 811 aa2.4□□□□□ -2.02
RTT107YHR154W PIN4P34217 668 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
RTT107YHR154W PXA2P34230 853 aa2.4□□□□□ -2.02
RTT107YHR154W SHU2P38957 223 aa2.4□□□□□ -2.02
RTT107YHR154W ADE16P54113 591 aaKnown RBP2.4□□□□□ -2.02
RTT107YHR154W MTQ2Q03920 221 aaPredicted RBP2.4□□□□□ -2.02
RTT107YHR154W PHM6Q05637 104 aa2.4□□□□□ -2.02
RTT107YHR154W MLC2Q06580 163 aa2.4□□□□□ -2.02
RTT107YHR154W GRX6Q12438 231 aa2.4□□□□□ -2.02
RTT107YHR154W HCA4P20448 770 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W DAL3P32459 195 aa2.4□□□□□ -2.03
RTT107YHR154W YKL077WP36081 392 aa2.4□□□□□ -2.03
RTT107YHR154W AHP1P38013 176 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W IES5P40060 125 aa2.4□□□□□ -2.03
RTT107YHR154W SAP185P40856 1058 aa2.4□□□□□ -2.03
RTT107YHR154W MET13P53128 600 aa2.4□□□□□ -2.03
RTT107YHR154W YNL165WP53891 406 aa2.4□□□□□ -2.03
RTT107YHR154W TIM50Q02776 476 aa2.4□□□□□ -2.03
RTT107YHR154W YML131WQ03102 365 aa2.4□□□□□ -2.03
RTT107YHR154W DUS3Q06053 668 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W AOS1Q06624 347 aa2.4□□□□□ -2.03
RTT107YHR154W UTP10P42945 1769 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W IKI3Q06706 1349 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W CDC9P04819 755 aa2.4□□□□□ -2.03
RTT107YHR154W MCM1P11746 286 aa2.4□□□□□ -2.03
RTT107YHR154W STE6P12866 1290 aa2.4□□□□□ -2.03
RTT107YHR154W MSD1P15179 658 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W SEC18P18759 758 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W SFL1P20134 766 aa2.4□□□□□ -2.03
RTT107YHR154W FUN30P31380 1131 aa2.4□□□□□ -2.03
RTT107YHR154W TRZ1P36159 838 aaPredicted RBP2.4□□□□□ -2.03
RTT107YHR154W UBS1P38290 277 aa2.4□□□□□ -2.03
RTT107YHR154W YBR238CP38330 731 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W YGR153WP48238 217 aa2.4□□□□□ -2.03
RTT107YHR154W BUL2Q03758 920 aaKnown RBP2.4□□□□□ -2.03
RTT107YHR154W EST2Q06163 884 aa2.4□□□□□ -2.03
RTT107YHR154W SPP382Q06411 708 aaPredicted RBP2.4□□□□□ -2.03
RTT107YHR154W PSR2Q07949 397 aa2.4□□□□□ -2.03
RTT107YHR154W FUR1P18562 216 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W MSM1P22438 575 aa2.39□□□□□ -2.03
RTT107YHR154W PYC2P32327 1180 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W MCM10P32354 571 aa2.39□□□□□ -2.03
RTT107YHR154W YKU70P32807 602 aa2.39□□□□□ -2.03
RTT107YHR154W SEC26P41810 973 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W CNN1P43618 361 aa2.39□□□□□ -2.03
RTT107YHR154W ALG2P43636 503 aa2.39□□□□□ -2.03
RTT107YHR154W YGL140CP53120 1219 aa2.39□□□□□ -2.03
RTT107YHR154W RSC1P53236 928 aa2.39□□□□□ -2.03
RTT107YHR154W TIF35Q04067 274 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W SXM1Q04175 944 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W YLR352WQ06479 807 aa2.39□□□□□ -2.03
RTT107YHR154W ENA1P13587 1091 aa2.39□□□□□ -2.03
RTT107YHR154W SEC23P15303 768 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W SYP1P25623 870 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W PER1P25625 357 aa2.39□□□□□ -2.03
RTT107YHR154W AMN1P38285 549 aaPredicted RBP2.39□□□□□ -2.03
RTT107YHR154W HSE1P38753 452 aa2.39□□□□□ -2.03
RTT107YHR154W IRC24P40580 263 aa2.39□□□□□ -2.03
RTT107YHR154W AIM14P53109 570 aa2.39□□□□□ -2.03
RTT107YHR154W GTR1Q00582 310 aa2.39□□□□□ -2.03
RTT107YHR154W SNP1Q00916 300 aaPredicted RBP2.39□□□□□ -2.03
RTT107YHR154W ENA2Q01896 1091 aa2.39□□□□□ -2.03
RTT107YHR154W CMR1Q12510 522 aaKnown RBP2.39□□□□□ -2.03
RTT107YHR154W ENA5Q12691 1091 aa2.39□□□□□ -2.03
RTT107YHR154W MSH1P25846 959 aa2.38□□□□□ -2.03
RTT107YHR154W SMY1P32364 656 aaKnown RBP2.38□□□□□ -2.03
RTT107YHR154W NFU1P32860 256 aa2.38□□□□□ -2.03
RTT107YHR154W BEM3P32873 1128 aa2.38□□□□□ -2.03
RTT107YHR154W APM2P38700 605 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms