RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C APL1P27351 700 aa3.33□□□□□ -1.88
RPN1YHR027C YJU2P28320 278 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C PEP7P32609 515 aa3.33□□□□□ -1.88
RPN1YHR027C SLA1P32790 1244 aa3.33□□□□□ -1.88
RPN1YHR027C MAL33P38157 468 aa3.33□□□□□ -1.88
RPN1YHR027C RFT1P38206 574 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C MCX1P38323 520 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C EFM4P40516 257 aa3.33□□□□□ -1.88
RPN1YHR027C UBP6P43593 499 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C RFX1P48743 811 aa3.33□□□□□ -1.88
RPN1YHR027C GCV2P49095 1034 aa3.33□□□□□ -1.88
RPN1YHR027C ATP22P50273 684 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C IPI3P53877 555 aa3.33□□□□□ -1.88
RPN1YHR027C CTF4Q01454 927 aa3.33□□□□□ -1.88
RPN1YHR027C EMI2Q04409 500 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C YML082WQ04533 649 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C JIP5Q06214 492 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C TAF3Q12297 353 aa3.33□□□□□ -1.88
RPN1YHR027C LPD1P09624 499 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C VMA1P17255 1071 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C YAP1P19880 650 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C PYC2P32327 1180 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C MVD1P32377 396 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C ATG19P35193 415 aa3.33□□□□□ -1.88
RPN1YHR027C APL2P36000 726 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C YKR015CP36111 568 aa3.33□□□□□ -1.88
RPN1YHR027C YBR062CP38239 180 aa3.33□□□□□ -1.88
RPN1YHR027C AST2P39945 430 aaKnown RBP3.33□□□□□ -1.88
RPN1YHR027C UTP18P40362 594 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C ESL1P40456 1118 aa3.33□□□□□ -1.88
RPN1YHR027C CKB1P43639 278 aa3.33□□□□□ -1.88
RPN1YHR027C BFA1P47113 574 aa3.33□□□□□ -1.88
RPN1YHR027C MDR1P53258 950 aa3.33□□□□□ -1.88
RPN1YHR027C YNL108CP53929 270 aa3.33□□□□□ -1.88
RPN1YHR027C YNL058CP53947 316 aa3.33□□□□□ -1.88
RPN1YHR027C MEC3Q02574 474 aa3.33□□□□□ -1.88
RPN1YHR027C YML020WQ03722 664 aa3.33□□□□□ -1.88
RPN1YHR027C TAF12Q03761 539 aa3.33□□□□□ -1.88
RPN1YHR027C GIR2Q03768 265 aaPredicted RBP3.33□□□□□ -1.88
RPN1YHR027C FIN1Q03898 291 aa3.33□□□□□ -1.88
RPN1YHR027C ATG17Q06410 417 aa3.33□□□□□ -1.88
RPN1YHR027C YOL057WQ08225 711 aa3.33□□□□□ -1.88
RPN1YHR027C ALR1Q08269 859 aa3.33□□□□□ -1.88
RPN1YHR027C GCN3P14741 305 aa3.32□□□□□ -1.88
RPN1YHR027C MER1P16523 270 aa3.32□□□□□ -1.88
RPN1YHR027C RPB4P20433 221 aaPredicted RBP3.32□□□□□ -1.88
RPN1YHR027C REC107P21651 314 aa3.32□□□□□ -1.88
RPN1YHR027C PEX1P24004 1043 aa3.32□□□□□ -1.88
RPN1YHR027C PRP22P24384 1145 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C YCR016WP25617 290 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C YCR051WP25631 222 aa3.32□□□□□ -1.88
RPN1YHR027C SIN4P32259 974 aa3.32□□□□□ -1.88
RPN1YHR027C YRO2P38079 344 aa3.32□□□□□ -1.88
RPN1YHR027C YAP3P38749 330 aa3.32□□□□□ -1.88
RPN1YHR027C NOC2P39744 710 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C SNL1P40548 159 aa3.32□□□□□ -1.88
RPN1YHR027C MRM2P53123 320 aa3.32□□□□□ -1.88
RPN1YHR027C CSI1Q04368 295 aa3.32□□□□□ -1.88
RPN1YHR027C TAP42Q04372 366 aa3.32□□□□□ -1.88
RPN1YHR027C YOR352WQ08816 343 aa3.32□□□□□ -1.88
RPN1YHR027C TAF10Q12030 206 aa3.32□□□□□ -1.88
RPN1YHR027C BAS1P22035 811 aa3.32□□□□□ -1.88
RPN1YHR027C VPS21P36017 210 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C ATP3P38077 311 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C RPH1P39956 796 aa3.32□□□□□ -1.88
RPN1YHR027C APS3P47064 194 aa3.32□□□□□ -1.88
RPN1YHR027C MCM6P53091 1017 aaKnown RBP3.32□□□□□ -1.88
RPN1YHR027C ENT1Q12518 454 aa3.32□□□□□ -1.88
RPN1YHR027C GPA2P10823 449 aa3.31□□□□□ -1.88
RPN1YHR027C TRM1P15565 570 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C OPI1P21957 404 aa3.31□□□□□ -1.88
RPN1YHR027C RAM2P29703 316 aa3.31□□□□□ -1.88
RPN1YHR027C ACH1P32316 526 aa3.31□□□□□ -1.88
RPN1YHR027C HXT3P32466 567 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C TDA3P38758 523 aa3.31□□□□□ -1.88
RPN1YHR027C PCF11P39081 626 aaPredicted RBP3.31□□□□□ -1.88
RPN1YHR027C PES4P39684 611 aa3.31□□□□□ -1.88
RPN1YHR027C YER034WP40022 185 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C VHR2P40041 505 aa3.31□□□□□ -1.88
RPN1YHR027C SPC105P53148 917 aa3.31□□□□□ -1.88
RPN1YHR027C MPS2P53159 387 aa3.31□□□□□ -1.88
RPN1YHR027C NGL3Q03210 505 aa3.31□□□□□ -1.88
RPN1YHR027C TMA64Q04600 565 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C PIG1Q06216 648 aa3.31□□□□□ -1.88
RPN1YHR027C UIP4Q08926 304 aa3.31□□□□□ -1.88
RPN1YHR027C YPL277CQ08989 487 aa3.31□□□□□ -1.88
RPN1YHR027C CDC53Q12018 815 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C ELG1Q12050 791 aa3.31□□□□□ -1.88
RPN1YHR027C RTP1Q12751 981 aa3.31□□□□□ -1.88
RPN1YHR027C TUS1Q06412 1307 aa3.31□□□□□ -1.88
RPN1YHR027C CDC8P00572 216 aa3.31□□□□□ -1.88
RPN1YHR027C RPB2P08518 1224 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C MSB1P21339 1137 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C RAD57P25301 460 aa3.31□□□□□ -1.88
RPN1YHR027C OAF3P36023 863 aa3.31□□□□□ -1.88
RPN1YHR027C JNM1P36224 373 aa3.31□□□□□ -1.88
RPN1YHR027C AAP1P37898 856 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C DYS1P38791 387 aa3.31□□□□□ -1.88
RPN1YHR027C RPN10P38886 268 aaKnown RBP3.31□□□□□ -1.88
RPN1YHR027C SIP5P40210 489 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 93.6 ms